| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0220 |
|---|
| Symbol | |
|---|
| ID | 6108999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 229082 |
|---|
| End bp | 229900 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641619976 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001747095 |
|---|
| Protein GI | 170719407 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.723702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACGC TCGTTACCCG CGATGGCACT TCGATCTATT ACAAGGACTG GGGCAGCGGC
AAGCCCGTGT TGTTCAGCCA TGGCTGGCCG TTGGATGCCG ACATGTGGGA CTCGCAGATG
GAGTACCTGG CTAGCCGCGG CTACCGCGCC ATTGCCTTCG ACCGTCGTGG TTTCGGCCGT
TCGAGCCAGC CCTGGAACGG CTATGACTAC GACACGTTCG CTGACGACAT CGCCCAGCTG
ATCGAGCACC TCGACCTGCG CGACGTGACC CTGGTGGGCT TCTCCATGGG TGGCGGCGAT
GTCAGCCGCT ACATTGCCCG CCACGGCAGC GAACGCGTTG CCGGCTTGGT GCTGCTGGGC
GCGGTGACGC CGGTGTTCGG CAAGCGTGAC GACAACCCGG ACGGTGTCGA CACCTCGGTA
TTCGACGGCA TCAAGGCTGG ACTGCGGGCG GATCGGGCGC AGTTCATCGC CGATTTCGCG
ACGCCGTTCT ATGGCCTGAA CCATGGGCAG CAGGTGTCTC AGGGTGTGCA GACGCAGACT
CTGAACATTG CCCTGATGGC TTCGATCAAG GGCACGCTGG ATTGTGTGAG TGCATTCTCC
GAAACCGACT TCCGCCCGGA CATGGCCAAG ATCGATGTGC CGACCTTGGT GATCCACGGT
GACGACGATC AGATCGTACC GTTCGAGACC ACCGGCAAGC GGGCCGCGGA GTTGATTCGT
GGGGCTGAGC TGAAGGTGTA CAGCGGGGCG CCGCACGGGT TTGCAGTGAC CCATGCGCAG
CAGCTCAATG AAGACCTGTT GGCGTTCCTG AGCCGCTGA
|
|---|
| Protein sequence | MTTLVTRDGT SIYYKDWGSG KPVLFSHGWP LDADMWDSQM EYLASRGYRA IAFDRRGFGR
SSQPWNGYDY DTFADDIAQL IEHLDLRDVT LVGFSMGGGD VSRYIARHGS ERVAGLVLLG
AVTPVFGKRD DNPDGVDTSV FDGIKAGLRA DRAQFIADFA TPFYGLNHGQ QVSQGVQTQT
LNIALMASIK GTLDCVSAFS ETDFRPDMAK IDVPTLVIHG DDDQIVPFET TGKRAAELIR
GAELKVYSGA PHGFAVTHAQ QLNEDLLAFL SR
|
|---|
| |