| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0201 |
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| Symbol | dadX |
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| ID | 6108980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 205252 |
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| End bp | 206325 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641619957 |
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| Product | alanine racemase |
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| Protein accession | YP_001747076 |
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| Protein GI | 170719388 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00394182 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCCCG CCCGTGCCCT GATCGACCTC CAAGCCCTGC GTCACAACTA CCGCCTTGCC
CGGGAACTGA CCGGCGCCAA GGCCCTCGCC GTGATCAAGG CCGACGCCTA CGGCCACGGT
GCCGTGCGTT GCGCTCTTGC GCTGGAAGCC GAAGCCGATG GCTTTGCCGT TGCGTGTATC
GAAGAGGCGC TGGAGTTGCG AGCGGCGGGT ATCAAGGCTC CGATGCTGCT GCTTGAAGGC
TTCTTCGAAG CCAGCGAGCT TTCGCTGATC GCCGAGCACG ACCTGTGGTG CGTAGTGCAT
TCGTTGTGGC AGCTGGAGGC CATCGAAAAG ACGCCCGTGC ACAAGCCATT GACCCTCTGG
CTCAAGCTCG ACAGCGGCAT GCACCGTGTC GGCCTGCACC CCAAGGACTA TCACGAGGCT
TACCAGCGCC TGCTGGCCAG CGGCAAGGTT GCGCGCATCG TGCTGATGAG CCATTTCGCC
CGTGCCGACG AGCTGGATGC CGATGCCACT GAGCAACAGA TTGCCGTATT CGAGGCTGCC
CGCCAGGGCT TGGCTGCCGA ATGCAGCCTG CGTAACTCGC CCGGCGTGCT TGCCTGGCCT
CATGCCCCGA GCGATTGGGT GCGCCCTGGC ATCATGCTGT ATGGCGCAAC ACCGTTCGAG
GTAGCGCAAG CCCAGGCCGA GCGCCTGCAG CCGGTGATGA CCCTGCAATC GCGGGTGATC
AGCGTGCGTG AGTTGCCTGC TGGCGAGCCG GTGGGCTATG GCGCCAAGTT CATCAGCCCA
CGCCCCACCC GAGTGGGCGT GGTTGCCATG GGCTACGCCG ACGGCTACCC CCGGCAAGCC
CCCACCGGCA CGCCGGTGAT GGTCGCCGGC AAGCGCAGCC AGCTGATTGG CCGCGTTTCC
ATGGACATGC TGTGCATCGA CCTGACCGAC GTGCCCGAAG CGACCATCGG CAGCCCGGTC
GAGCTATGGG GCAAGCACGT GTTGGCCAGT GAAGTCGCCA TGCACGCAGG GACCATCCCC
TACCAGATCT TCTGTAACCT CAAACGCGTG CCGCTGGACT ATTTCGGCGA ATGA
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| Protein sequence | MRPARALIDL QALRHNYRLA RELTGAKALA VIKADAYGHG AVRCALALEA EADGFAVACI
EEALELRAAG IKAPMLLLEG FFEASELSLI AEHDLWCVVH SLWQLEAIEK TPVHKPLTLW
LKLDSGMHRV GLHPKDYHEA YQRLLASGKV ARIVLMSHFA RADELDADAT EQQIAVFEAA
RQGLAAECSL RNSPGVLAWP HAPSDWVRPG IMLYGATPFE VAQAQAERLQ PVMTLQSRVI
SVRELPAGEP VGYGAKFISP RPTRVGVVAM GYADGYPRQA PTGTPVMVAG KRSQLIGRVS
MDMLCIDLTD VPEATIGSPV ELWGKHVLAS EVAMHAGTIP YQIFCNLKRV PLDYFGE
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