Gene PputW619_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0197 
Symbol 
ID6108976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp201406 
End bp202698 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content65% 
IMG OID641619953 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001747072 
Protein GI170719384 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00048613 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCACA GCGCGCAGCA CGCCGCCTCC TACTACGCCG CCAGCAGCGC GCCACACCCC 
GATCACCCGT TCCTGCAAGG CGAGCACAGC GCCGACGTGT GCATCGTTGG CGGCGGCTAT
TCGGGCCTGA ACACCGCCAT CGAGCTGGCC GAACGCGGCC TGTCGGTGAT CCTGCTGGAA
GCGCGCAAGC TCGGCTGGGG GGCCAGCGGG CGCAATGGCG GCCAGCTTAT CCGGGGCGTC
GGCCACGGCC TGGAGCAGTT CCGTGCGGTG ATCGGTGAGG AAGGCGTCCG CAGCATGAAG
CTGATGGGCC TGGAAGCCGT GGACATCGTC CGTGAACGGG TCGAGCGCCA CGCCATCGCC
TGCGACCTGA CCTGGGGTTA CTGCGACCTG GCCAACAAGC CCGGCGAGCT GCAAGGCTTC
GCCGAAGATG CCGAAGAACT GCGCAGCCTT GGCTACCGTC ACGAACTGCG CCTGGTGCAC
AAAGACGATA TCCACAGCGT GGTCGGCTCC GACTGTTATG TCGGCGGCCT GATCGATATG
GGCTCAGGGC ACCTGCACCC ACTCAACCTG GCGCTCGGCG AAGCGGCCGT GGCCAGCCGT
CTCGGTGTGC AACTATACGA GCAATCGGAA GTCAGCCGCA TCGAGTACGG CCCCGAAGTG
AAGGTGCACA CCGGCCAAGG CCGGGTGCGC GCCAAAACCC TGGTGCTGTG CTGCAACGCC
TATCACAACG GCCTCAACCG CGAATTGGGC GGCAAAGTGC TGCCAGCAGG TAGCTACATC
ATCGCCACCG AACCGCTGGG TGAGGAACGC GCGCGCCAAC TGCTGCCGCA GAACATGGCG
GTGTGCGACC AGCGCGTGGC GCTGGACTAC TACCGCCTGT CCGCCGACCA CCGTCTGCTG
TTCGGCGGTG CCTGCCATTA CTCCGGCCGC GACCCACAGG ACATTGCCGC CTATATGCGG
CCGAAGATGC TCAAGGTGTT CCCGCAACTG GCCGATGTGC GCATCGATTA CCAGTGGGGT
GGGATGATCG GCATCGGCGC CAACCGCCTG CCACAGATCG GCCGCCTGGC CAGCCAGCCG
AATGTTTACT ACGCCCAGGC CTACTCTGGC CATGGGCTCA ACGCCACCCA CCTGGCAGCG
CGCCTGCTGG GTGAAGCCAT CAGCGGCCAG CAAAGCGGGC GCTTCGATCT GTTCGCCAAG
GTGCCACACA TCACCTTCCC TGGCGGCAAA CACCTGCGCT CGCCGCTGCT GGCGTTGGGG
ATGTTGTGGC ACAGGCTCAA AGAATTGACC TGA
 
Protein sequence
MIHSAQHAAS YYAASSAPHP DHPFLQGEHS ADVCIVGGGY SGLNTAIELA ERGLSVILLE 
ARKLGWGASG RNGGQLIRGV GHGLEQFRAV IGEEGVRSMK LMGLEAVDIV RERVERHAIA
CDLTWGYCDL ANKPGELQGF AEDAEELRSL GYRHELRLVH KDDIHSVVGS DCYVGGLIDM
GSGHLHPLNL ALGEAAVASR LGVQLYEQSE VSRIEYGPEV KVHTGQGRVR AKTLVLCCNA
YHNGLNRELG GKVLPAGSYI IATEPLGEER ARQLLPQNMA VCDQRVALDY YRLSADHRLL
FGGACHYSGR DPQDIAAYMR PKMLKVFPQL ADVRIDYQWG GMIGIGANRL PQIGRLASQP
NVYYAQAYSG HGLNATHLAA RLLGEAISGQ QSGRFDLFAK VPHITFPGGK HLRSPLLALG
MLWHRLKELT