Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0197 |
Symbol | |
ID | 6108976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 201406 |
End bp | 202698 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641619953 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001747072 |
Protein GI | 170719384 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00048613 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATTCACA GCGCGCAGCA CGCCGCCTCC TACTACGCCG CCAGCAGCGC GCCACACCCC GATCACCCGT TCCTGCAAGG CGAGCACAGC GCCGACGTGT GCATCGTTGG CGGCGGCTAT TCGGGCCTGA ACACCGCCAT CGAGCTGGCC GAACGCGGCC TGTCGGTGAT CCTGCTGGAA GCGCGCAAGC TCGGCTGGGG GGCCAGCGGG CGCAATGGCG GCCAGCTTAT CCGGGGCGTC GGCCACGGCC TGGAGCAGTT CCGTGCGGTG ATCGGTGAGG AAGGCGTCCG CAGCATGAAG CTGATGGGCC TGGAAGCCGT GGACATCGTC CGTGAACGGG TCGAGCGCCA CGCCATCGCC TGCGACCTGA CCTGGGGTTA CTGCGACCTG GCCAACAAGC CCGGCGAGCT GCAAGGCTTC GCCGAAGATG CCGAAGAACT GCGCAGCCTT GGCTACCGTC ACGAACTGCG CCTGGTGCAC AAAGACGATA TCCACAGCGT GGTCGGCTCC GACTGTTATG TCGGCGGCCT GATCGATATG GGCTCAGGGC ACCTGCACCC ACTCAACCTG GCGCTCGGCG AAGCGGCCGT GGCCAGCCGT CTCGGTGTGC AACTATACGA GCAATCGGAA GTCAGCCGCA TCGAGTACGG CCCCGAAGTG AAGGTGCACA CCGGCCAAGG CCGGGTGCGC GCCAAAACCC TGGTGCTGTG CTGCAACGCC TATCACAACG GCCTCAACCG CGAATTGGGC GGCAAAGTGC TGCCAGCAGG TAGCTACATC ATCGCCACCG AACCGCTGGG TGAGGAACGC GCGCGCCAAC TGCTGCCGCA GAACATGGCG GTGTGCGACC AGCGCGTGGC GCTGGACTAC TACCGCCTGT CCGCCGACCA CCGTCTGCTG TTCGGCGGTG CCTGCCATTA CTCCGGCCGC GACCCACAGG ACATTGCCGC CTATATGCGG CCGAAGATGC TCAAGGTGTT CCCGCAACTG GCCGATGTGC GCATCGATTA CCAGTGGGGT GGGATGATCG GCATCGGCGC CAACCGCCTG CCACAGATCG GCCGCCTGGC CAGCCAGCCG AATGTTTACT ACGCCCAGGC CTACTCTGGC CATGGGCTCA ACGCCACCCA CCTGGCAGCG CGCCTGCTGG GTGAAGCCAT CAGCGGCCAG CAAAGCGGGC GCTTCGATCT GTTCGCCAAG GTGCCACACA TCACCTTCCC TGGCGGCAAA CACCTGCGCT CGCCGCTGCT GGCGTTGGGG ATGTTGTGGC ACAGGCTCAA AGAATTGACC TGA
|
Protein sequence | MIHSAQHAAS YYAASSAPHP DHPFLQGEHS ADVCIVGGGY SGLNTAIELA ERGLSVILLE ARKLGWGASG RNGGQLIRGV GHGLEQFRAV IGEEGVRSMK LMGLEAVDIV RERVERHAIA CDLTWGYCDL ANKPGELQGF AEDAEELRSL GYRHELRLVH KDDIHSVVGS DCYVGGLIDM GSGHLHPLNL ALGEAAVASR LGVQLYEQSE VSRIEYGPEV KVHTGQGRVR AKTLVLCCNA YHNGLNRELG GKVLPAGSYI IATEPLGEER ARQLLPQNMA VCDQRVALDY YRLSADHRLL FGGACHYSGR DPQDIAAYMR PKMLKVFPQL ADVRIDYQWG GMIGIGANRL PQIGRLASQP NVYYAQAYSG HGLNATHLAA RLLGEAISGQ QSGRFDLFAK VPHITFPGGK HLRSPLLALG MLWHRLKELT
|
| |