Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0188 |
Symbol | rpmB |
ID | 6108967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 193785 |
End bp | 194021 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619944 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_001747063 |
Protein GI | 170719375 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000190685 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGAGAG TCTGTCAAGT TACTGGTAAG GGTCCAGTAA CCGGGAACAA CATTTCCCAC GCAAACAACA AAACCCGTCG TCGTTTCCTG CCGAACCTGC AGCACCACCG TTTCTGGGTT GAATCCGAGA ACCGTTTCGT GCGTCTGCGC GTATCTGCCA AAGGCATGCG CGTCATTGAC AAGCGTGGTA TCGACGTAGT GCTGGCCGAG CTGCGTGCTC GCGGCGAAAA GTTCTAA
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Protein sequence | MSRVCQVTGK GPVTGNNISH ANNKTRRRFL PNLQHHRFWV ESENRFVRLR VSAKGMRVID KRGIDVVLAE LRARGEKF
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