Gene PputW619_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0188 
SymbolrpmB 
ID6108967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp193785 
End bp194021 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content54% 
IMG OID641619944 
Product50S ribosomal protein L28 
Protein accessionYP_001747063 
Protein GI170719375 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000190685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAGAG TCTGTCAAGT TACTGGTAAG GGTCCAGTAA CCGGGAACAA CATTTCCCAC 
GCAAACAACA AAACCCGTCG TCGTTTCCTG CCGAACCTGC AGCACCACCG TTTCTGGGTT
GAATCCGAGA ACCGTTTCGT GCGTCTGCGC GTATCTGCCA AAGGCATGCG CGTCATTGAC
AAGCGTGGTA TCGACGTAGT GCTGGCCGAG CTGCGTGCTC GCGGCGAAAA GTTCTAA
 
Protein sequence
MSRVCQVTGK GPVTGNNISH ANNKTRRRFL PNLQHHRFWV ESENRFVRLR VSAKGMRVID 
KRGIDVVLAE LRARGEKF