Gene PputW619_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0181 
SymbolpyrE 
ID6108960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp186114 
End bp186755 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID641619937 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001747056 
Protein GI170719368 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0223943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value6.86039e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCCGT ATCAGCGCGA CTTCATCCGT TTTGCCATCG ATCGCGGCGT TCTGCGCTTC 
GGTGAATTCA CCCTGAAATC GGGGCGTACA AGCCCGTATT TCTTCAATGC CGGCCTGTTC
AACACAGGTT CTGCCCTGGC TCAGTTGGGG CGTTGCTATG CGGCGGCCAT CGTCGACAGC
AAGATCCCGT TCGACGTACT GTTCGGCCCG GCCTACAAGG GTATCCCCCT GGCAGCGGCC
ACCGCCGTGG CCCTGGCCGA GCAACATCAG CTGGACGTGC CGTGGTGCTT CAACCGCAAG
GAAGCCAAGG ATCACGGCGA AGGCGGCAGC CTGGTCGGCG CGCCACTGGC CGGTGACGTC
CTGATCATCG ATGACGTGAT CACCGCTGGC ACTGCCATCC GCGAGGTCAT GCAGATCATC
AATGCCCAGC AGGCCAAGGC CGCTGGCGTG CTGATCGCGC TCAACCGCGA AGAGCGCGGC
AATGGCGAAC TGTCGGCGAT CCAGGAAGTG GAGCGTGACT TCGGTATCCC AGTAGTCAGC
ATCGTTTCGC TGACCCAGGT GCTGGAGTTC CTGGCCGATG ATCCGCAGCT CAAGCAGCAT
CTGCCGGCGG TCGAAGCCTA TCGGGCGCAG TACGGTATCT GA
 
Protein sequence
MQPYQRDFIR FAIDRGVLRF GEFTLKSGRT SPYFFNAGLF NTGSALAQLG RCYAAAIVDS 
KIPFDVLFGP AYKGIPLAAA TAVALAEQHQ LDVPWCFNRK EAKDHGEGGS LVGAPLAGDV
LIIDDVITAG TAIREVMQII NAQQAKAAGV LIALNREERG NGELSAIQEV ERDFGIPVVS
IVSLTQVLEF LADDPQLKQH LPAVEAYRAQ YGI