| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0172 |
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| Symbol | rpoZ |
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| ID | 6108951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 177320 |
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| End bp | 177583 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641619928 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_001747047 |
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| Protein GI | 170719359 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.840834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0041623 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCCGCG TAACTGTTGA AGACTGCCTG GAACACGTGG ATAACCGTTT TGAGCTGGTC
ATGCTCTCGA CCAAGCGCGC CCGTCAGCTG GCTACCGGCG GCAAAGAGCC ACGCGTAGCG
TGGGAAAACG ACAAGCCAAC CGTCGTTGCC CTGCGTGAAA TCGCAGAAGG CATCGTCACC
AACGAATTCA TTGCCGCTGA AGAGATCGTC ACCGAGGATC CGGTCTTCGC CGCGTTCGAG
GACGAGTCCA ACGAGGCTGT CTGA
|
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| Protein sequence | MARVTVEDCL EHVDNRFELV MLSTKRARQL ATGGKEPRVA WENDKPTVVA LREIAEGIVT
NEFIAAEEIV TEDPVFAAFE DESNEAV
|
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