| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0133 |
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| Symbol | |
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| ID | 6108912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 137264 |
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| End bp | 138307 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641619889 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001747008 |
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| Protein GI | 170719320 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.758877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGA TCTATTCCGA TGACCACCGC CTGCACCACG GCCGCTGCGA GCTGATCGAC
GGCAAGCTGA TGCCCTGCTT CGAAATGCCT TCGCGCGCCG ACCATGTGCT CGAGCAGGTG
AAAAAGCGCA ACCTCGGTGA TGTCCAGGGC CCGACCGACT TTGGCCGTGC ACCGCTGCAG
CGCATCCACA GCGCCGACTA TCTCGACTTC TTCGAAGGCG CCTGGGCACG TTGGGCCGCG
CTGGGTCAGG AAGGCGACCT GCTGCCCTTC ACCTGGCCGG CACGCACCTT GCGCCAAGTC
AAACCCACCG GCCTGCATGG CGAATTGGGT TACTACAGTT TCGATGCCGG CGCGCCCATC
ACCGCAGGCA CATGGCAGGC CGCCTACAGC GCAGCACAGG TTGCCCTCAC CGCCCAGGCT
GCAATCGAGC AAGGCGCCCA TGCCGCCTTC GCCCTGTGCC GCCCACCAGG GCATCACGCC
GCCGCCGAAG TGATGGGAGG TTACTGCTAC CTGAACAACG CCGCGATCGC TGCCCAGGCC
TTCCTCGACC AAGGCAGGGC CAGGGTGGCC ATCCTTGACG TCGACTACCA CCATGGCAAT
GGCACCCAGG ACATCTTCTA CCAGCGCGAT GACGTGTTCT TCGCCTCGAT CCACGGCGAT
CCGCAAGACG AGTTTCCGTT CTTCCTCGGC TACGCGGACG AAACCGGCGC AGGCGCGGGC
GAAGGCTGCA ACATCAACTA TCCGCTGCCA GCGGGCAGTG ACTGGGCCGC CTGGAGCGCC
GCGCTGGAAG ACGCCTGCGA GCGCATCGCA GACTACGACG CCGACGTCCT TGTCATCTCT
CTTGGCGTGG ATACCTTCAA GGATGATCCT ATCTCCCAGT TCAAGCTGGA CAGCCCGGAC
TACCTGAAGA TGGGCAAACG TATCGCCCAA CTCGGCAAGC CGACCTTGTT TGTGATGGAA
GGCGGCTACG CAGTGGAAGA AATCGGTATC AACGCGGTCA ATGTGCTGGA AGGTTTCCAG
CTCGCCCAGC CAGGAGCCCG ATAA
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| Protein sequence | MLTIYSDDHR LHHGRCELID GKLMPCFEMP SRADHVLEQV KKRNLGDVQG PTDFGRAPLQ
RIHSADYLDF FEGAWARWAA LGQEGDLLPF TWPARTLRQV KPTGLHGELG YYSFDAGAPI
TAGTWQAAYS AAQVALTAQA AIEQGAHAAF ALCRPPGHHA AAEVMGGYCY LNNAAIAAQA
FLDQGRARVA ILDVDYHHGN GTQDIFYQRD DVFFASIHGD PQDEFPFFLG YADETGAGAG
EGCNINYPLP AGSDWAAWSA ALEDACERIA DYDADVLVIS LGVDTFKDDP ISQFKLDSPD
YLKMGKRIAQ LGKPTLFVME GGYAVEEIGI NAVNVLEGFQ LAQPGAR
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