| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0132 |
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| Symbol | |
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| ID | 6108911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 136161 |
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| End bp | 137264 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641619888 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001747007 |
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| Protein GI | 170719319 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.911312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.781797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGAC TTAAGTGCCT GCTCGCCCCA CTCATAGCAA CCACCCTGTT CACCGGTGCC
TTCCAGGCAC AAGCCGAACA GCGCACCTTG CGCGTGTACA ACTGGTTCGA TTACATCACC
CCGCAAACCT TGACCGGTTT CCAGAAGGAC AGCGGCGTCA AGCTGGTCTA CGACATCTTC
GACACCAACG AAGCCCTGGA AGCGAAGCTG CTAACAGGCA ACTCCGGCTA CGACGTGGTA
GTACCGTCCA ACGTGTTTCT CGCCAAGCAG ATCGAGGCGG GGGTGTTCCA GCCACTGGAC
CGCAGCAAGC TGCCGAACTG GCAACACTTG GACCCGGCAC TGATGAAGCT CATCGAGGCC
AACGATCCGG GCAACAAGTT CGCCGTGCCC TACATGTACG GCACGGTGCT GATCGGCTTC
AACCCGGACA AGGTCAAGGC GGTACTTGGC GACACGGCTC CCGTGGACAG CTGGGACCTG
CTCTTCAAGG AAGAGAACAT CGCCAAACTC AAGCAGTGCG GCGTAGCGCT GCTTGACTCG
CCATCAGAGA TCCTGCCTCT GGCGTTGCAA TACCTGGGGC TGGACCCCAA CAGCAGCAAG
CCGGATGACT ACAAGCAAGC CGAAGCTCTG CTGCAGAAGA TCCGCCCCTA CATCACCTAC
TTCCACTCTT CCAAGTACAT GGCAGATATC GCCAACGGTG ACATCTGCGT TGCCGTTGGT
TATTCCGGTA GTTTCTCCCA GGCAGCAAAC CGCGCCCGGG ATGCGAAGAA CGGTGTGGTG
GTGGACATGC GCCTGCCCAA GGAGGGGGCG CCGATATGGT TCGACATGCT GGCGATTCCG
AAGGGCGCCG CCAACCCGGA GGATGCGCAT ACGTTCATCA ACTACCTGCT GCGCCCAGAG
GTGATTGCCC CGATCAGCGA CTTTGTCGGC TACCCGAACC CGAACAAGGA TGCGACGGAA
AAGGTCAGCC CTGCGATTCG CAATAATCCC AACCTGTATC CGACAGCCGA AGCGATGGCC
AAGCTGTATA CGCTCAAGCC TTTGACGCGT GAGGCAGAGC GGGCGAGGAC GCGGGCCTGG
ACCAGGATCA AGTCCGGGAC TTGA
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| Protein sequence | MVRLKCLLAP LIATTLFTGA FQAQAEQRTL RVYNWFDYIT PQTLTGFQKD SGVKLVYDIF
DTNEALEAKL LTGNSGYDVV VPSNVFLAKQ IEAGVFQPLD RSKLPNWQHL DPALMKLIEA
NDPGNKFAVP YMYGTVLIGF NPDKVKAVLG DTAPVDSWDL LFKEENIAKL KQCGVALLDS
PSEILPLALQ YLGLDPNSSK PDDYKQAEAL LQKIRPYITY FHSSKYMADI ANGDICVAVG
YSGSFSQAAN RARDAKNGVV VDMRLPKEGA PIWFDMLAIP KGAANPEDAH TFINYLLRPE
VIAPISDFVG YPNPNKDATE KVSPAIRNNP NLYPTAEAMA KLYTLKPLTR EAERARTRAW
TRIKSGT
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