Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0122 |
Symbol | |
ID | 6109292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 127550 |
End bp | 128677 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641619878 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_001746997 |
Protein GI | 170719309 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.946881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGAC ATCCACCAGT CTGGATGGGC CTCCTGTTGT GGTTGGTTTT AGGTCAGGCC AACGCCGCCT GGACCGTGAA CATGGCGCCG GGGGCGACGG AAGTCTCCAA CGCCGTGTTC GACCTGCACA TGACCATCTT CTGGATCTGC GTGATCATCG GCGTCGTGGT GTTCGGCGCG ATGTTCTGGT CCATGGTCAT CCACCGCCGT TCCACCGGCC AGCAAGCTGC GCATTTTCAC GAGCACACCT GGGTGGAAAT CTTGTGGACC GTGGTCCCCT TGCTCATCCT GGTGGCCATG GCCATCCCCG CCACCAAGAC CCTGATCGAT ATCTACGACG CCAGCGAATC GGACATTGAT ATCCAGGTTA CGGGCTACCA GTGGAAATGG CACTACAAAT ACCTGGGCCA GGACGTGGAG TTCTTCAGCA ACCTGGCCAC TCCTGCCGAC CAGATCCAGA ACAAGGCGCC CAAGGACGAG CACTACCTGC TTGAGGTCGA CCAGCCGCTG GTGCTGCCGG TGGGGGCGAA AGTGCGCTTT CTGGTGACGG CCGCCGACGT GATCCATTCC TGGTGGGTAC CGGCTTTCGC GGTCAAGCGT GACGCCATCC CCGGCTTTGT CAACGAAGCC TGGACGCGTG TCGAAAAGCC CGGCATCTAT CGCGGCCAAT GCACCGAGCT GTGTGGCAAG GATCACGGTT TCATGCCGGT GGTGGTGGAG GTCAAATCCA AGGCCGACTA CGACACCTGG CTCGGCGAGC GCAAGGCCGA AGCGGCCAAA CTCAAGGAGC TGACCAGCAA GGAATGGACC CTTGAAGAGT TGGTCGCGCG CGGCGACAAG GTTTATCACA CCACCTGCGT GGCCTGTCAC CAGGCCGAAG GCCAGGGCTT GCCGCCGATG TTCCCGGCAC TCAAGGGTTC GAAGATCGCC ACCGGCCCCA AGGATGCCCA CCTGAACATC GTCTTCCACG GCAAGCCCGG TACCTCCATG GCGGCCTTCG GCAAGCAGCT GTCTGAGGTC GATATCGCCG CCGTGGTCAC TTACGAGCGC AACGCCTGGG GCAATGACAA AGGCGACATG GTCACACCGA AGGACGTGCT GGCGCTCAAG CAGGCACAAG CGCAATGA
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Protein sequence | MMRHPPVWMG LLLWLVLGQA NAAWTVNMAP GATEVSNAVF DLHMTIFWIC VIIGVVVFGA MFWSMVIHRR STGQQAAHFH EHTWVEILWT VVPLLILVAM AIPATKTLID IYDASESDID IQVTGYQWKW HYKYLGQDVE FFSNLATPAD QIQNKAPKDE HYLLEVDQPL VLPVGAKVRF LVTAADVIHS WWVPAFAVKR DAIPGFVNEA WTRVEKPGIY RGQCTELCGK DHGFMPVVVE VKSKADYDTW LGERKAEAAK LKELTSKEWT LEELVARGDK VYHTTCVACH QAEGQGLPPM FPALKGSKIA TGPKDAHLNI VFHGKPGTSM AAFGKQLSEV DIAAVVTYER NAWGNDKGDM VTPKDVLALK QAQAQ
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