Gene PputW619_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0122 
Symbol 
ID6109292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp127550 
End bp128677 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content61% 
IMG OID641619878 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_001746997 
Protein GI170719309 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.946881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAC ATCCACCAGT CTGGATGGGC CTCCTGTTGT GGTTGGTTTT AGGTCAGGCC 
AACGCCGCCT GGACCGTGAA CATGGCGCCG GGGGCGACGG AAGTCTCCAA CGCCGTGTTC
GACCTGCACA TGACCATCTT CTGGATCTGC GTGATCATCG GCGTCGTGGT GTTCGGCGCG
ATGTTCTGGT CCATGGTCAT CCACCGCCGT TCCACCGGCC AGCAAGCTGC GCATTTTCAC
GAGCACACCT GGGTGGAAAT CTTGTGGACC GTGGTCCCCT TGCTCATCCT GGTGGCCATG
GCCATCCCCG CCACCAAGAC CCTGATCGAT ATCTACGACG CCAGCGAATC GGACATTGAT
ATCCAGGTTA CGGGCTACCA GTGGAAATGG CACTACAAAT ACCTGGGCCA GGACGTGGAG
TTCTTCAGCA ACCTGGCCAC TCCTGCCGAC CAGATCCAGA ACAAGGCGCC CAAGGACGAG
CACTACCTGC TTGAGGTCGA CCAGCCGCTG GTGCTGCCGG TGGGGGCGAA AGTGCGCTTT
CTGGTGACGG CCGCCGACGT GATCCATTCC TGGTGGGTAC CGGCTTTCGC GGTCAAGCGT
GACGCCATCC CCGGCTTTGT CAACGAAGCC TGGACGCGTG TCGAAAAGCC CGGCATCTAT
CGCGGCCAAT GCACCGAGCT GTGTGGCAAG GATCACGGTT TCATGCCGGT GGTGGTGGAG
GTCAAATCCA AGGCCGACTA CGACACCTGG CTCGGCGAGC GCAAGGCCGA AGCGGCCAAA
CTCAAGGAGC TGACCAGCAA GGAATGGACC CTTGAAGAGT TGGTCGCGCG CGGCGACAAG
GTTTATCACA CCACCTGCGT GGCCTGTCAC CAGGCCGAAG GCCAGGGCTT GCCGCCGATG
TTCCCGGCAC TCAAGGGTTC GAAGATCGCC ACCGGCCCCA AGGATGCCCA CCTGAACATC
GTCTTCCACG GCAAGCCCGG TACCTCCATG GCGGCCTTCG GCAAGCAGCT GTCTGAGGTC
GATATCGCCG CCGTGGTCAC TTACGAGCGC AACGCCTGGG GCAATGACAA AGGCGACATG
GTCACACCGA AGGACGTGCT GGCGCTCAAG CAGGCACAAG CGCAATGA
 
Protein sequence
MMRHPPVWMG LLLWLVLGQA NAAWTVNMAP GATEVSNAVF DLHMTIFWIC VIIGVVVFGA 
MFWSMVIHRR STGQQAAHFH EHTWVEILWT VVPLLILVAM AIPATKTLID IYDASESDID
IQVTGYQWKW HYKYLGQDVE FFSNLATPAD QIQNKAPKDE HYLLEVDQPL VLPVGAKVRF
LVTAADVIHS WWVPAFAVKR DAIPGFVNEA WTRVEKPGIY RGQCTELCGK DHGFMPVVVE
VKSKADYDTW LGERKAEAAK LKELTSKEWT LEELVARGDK VYHTTCVACH QAEGQGLPPM
FPALKGSKIA TGPKDAHLNI VFHGKPGTSM AAFGKQLSEV DIAAVVTYER NAWGNDKGDM
VTPKDVLALK QAQAQ