Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0111 |
Symbol | |
ID | 6109281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 114606 |
End bp | 115697 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641619867 |
Product | hypothetical protein |
Protein accession | YP_001746986 |
Protein GI | 170719298 |
COG category | [R] General function prediction only |
COG ID | [COG4324] Predicted aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.163649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0432694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTGGT TTTTTCTTTT GAGGCGCTCA GGCCCTGGGC CACTCGACCG TGTTTTCAGC ACTTTGGTTC CCGTGCTGGG CGCCTTTCTG CTGAGTGGTT GCAGCAGTCT TTCCTATTAC GGCCAGTTGG CCGATGGCCA GTGGCAACTG TTGCGTGCAC GTCAGCCGGT GGAGCGGGTA CTCGCTGACC CGGCCAGCAG CCCGCAGTTG CGGGCCCGTC TGCAACACGC CGAGCAGGCG CGGCTGTTCG CCAGCAAGCG CCTGGGCCTG CCGGACAACG GTAGCTATCG GGTGTATGCC GACCTTGGGC GGCCCTATGT GGTGTGGAAT GTGTTTGCTA CGCCTGAGCT CTCGCTGCAA CCGGTGACGC ACTGTTTCCC TATTGCCGGT TGCGTCGCCT ACCGCGGCTA TTACCAACAG GGCGCGGCCC GCGGCGCGGC GGCGGTGATG CGTCAGGCAG GCATGGATGT CTATGTGAGC GGTGTCGAGG CTTATTCGAC GCTTGGCTGG TTCGACGATC CGATCCTGTC GTCGATGGTC GGCTGGGGTG ATGAGCGCCT GGCCGCGTTG ATCTTCCACG AACTGGCGCA TCAGCGCCTC TATGTGCAGG ACGACACGGA GTTCAACGAG TCCTTCGCCA CATTCGTCGA GCAGGAAGGA ACGCGGCAAT GGCGCGCCGC CCGTGGGCTT GAAGCGACTC AGGGTGAGCA GAGCCTGCAG CGTGACCAGT TCATACGGCT GATTCTGGCC AGCCGCGAGC GGCTGCAGGC GCTCTATGCA GGGCCGCTGG ATGACGCACA CAAACGTGCG GCCAAGCAGG CAGAATTCGA GCGGTTGAGG CGCGATTATC GACAGGTTCG AGATAGCCAG TGGGCTGGGG ACAAGCGTTA TGACGCCTGG ATGTATGGGC CGATGAGCAA TGCCAAGCTA TTGCCGTTTG GGCTGTATGA CCAATGGGTG CCGGCGTTTG CGGTGGTGTT TCGCGAGGCT GGGGGGGATT GGGTACGCTT CTATCAGAAG GTAGAAGCGC TAGGACGGTT GCCGGCCGAA CAGCGCAAGG CGGTGTTGGC TCGATTGGTG GCCAGTCAGT GA
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Protein sequence | MVWFFLLRRS GPGPLDRVFS TLVPVLGAFL LSGCSSLSYY GQLADGQWQL LRARQPVERV LADPASSPQL RARLQHAEQA RLFASKRLGL PDNGSYRVYA DLGRPYVVWN VFATPELSLQ PVTHCFPIAG CVAYRGYYQQ GAARGAAAVM RQAGMDVYVS GVEAYSTLGW FDDPILSSMV GWGDERLAAL IFHELAHQRL YVQDDTEFNE SFATFVEQEG TRQWRAARGL EATQGEQSLQ RDQFIRLILA SRERLQALYA GPLDDAHKRA AKQAEFERLR RDYRQVRDSQ WAGDKRYDAW MYGPMSNAKL LPFGLYDQWV PAFAVVFREA GGDWVRFYQK VEALGRLPAE QRKAVLARLV ASQ
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