| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0109 |
|---|
| Symbol | |
|---|
| ID | 6109279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 113657 |
|---|
| End bp | 114070 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641619865 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_001746984 |
|---|
| Protein GI | 170719296 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.655067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00731713 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGC CCATGATGCT GATGGCCCTC AGTGCATTGG GGGCATGCGC CAGCCCCTTG
CCCCCCGTAG ACCCCAAGCA GGCCTGGGTC GACCTCTACA CCATCACGCC CGGCCGAGTC
ATCATGGCGG ACAAGCTCGA CGGCAAGCGC CTGGAGGACG GCCGTTACTT CCAGGTCACG
CCCGGCAAGC ACGAACTGGT GGTGCGCTTC GATTATGAAA TTTACGGGGG CGGCATGATG
AGCCAGCCCA GGGATCGAAC CTGTTACCTG ACCGTGCGCT TTGACGATTT CAAGGCAGGC
GAACGCTATC GTCTGGAGGC GCGTGCACCA GTAATGGAAC CGCAAGTGCT TTTGTATGAC
GCCAGCCGCA CAGTGGTGGT CAACGAACCC AGCAATGTGT TCTGTATTCC CTGA
|
|---|
| Protein sequence | MRQPMMLMAL SALGACASPL PPVDPKQAWV DLYTITPGRV IMADKLDGKR LEDGRYFQVT
PGKHELVVRF DYEIYGGGMM SQPRDRTCYL TVRFDDFKAG ERYRLEARAP VMEPQVLLYD
ASRTVVVNEP SNVFCIP
|
|---|
| |