| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0075 |
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| Symbol | |
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| ID | 6109245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 81572 |
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| End bp | 83218 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641619831 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001746950 |
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| Protein GI | 170719262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0217236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000166725 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATCAG CCGATTCTGT CTTCGACTAC GTTATCGTGG GTGCCGGTCC TGCCGGTTGC
CTGCTGGCCA ATCGGTTGTC CGCCGACCCG TCCTGCCGCG TATTGCTGCT GGAAGCCGGG
GGCCGCGACA ATTACCCCTG GATTCACATC CCCGTCGGTT ACCTTTACTG CATCGGCAAC
CCCCGCACTG ACTGGTGCTT CAAGACCGCG GCGCAAATCG GCCTGGGTGG TCGCAGCCTG
GGTTACCCCC GGGGCAAGGT GCTGGGGGGC TGCTCATCGA TCAACGGCAT GATCTATATG
CGTGGCCAGG CTGCGGACTA TGACCATTGG GCCGAACAGG GCAATGACGG TTGGGCCTGG
AAGGACGTGC TGCCGCTGTT CAAGGCCAGC GAAAATCACT TTGCAGGTGG CAGTGATCAC
CATGGCGCCA CTGGCGAATG GCGGGTGGAA CGCCAGCGCT ACAGTTGGCC GATCCTCGAT
GCATTCCGAG ATGCCGCCGA GCAGAGCGGT ATCGCCAAGG TCGATGACTT CAATACCGGC
GACAACCAAG GCTGTGGATA TTTTCAGGTC AACCAGCGCA GCGGTGTGCG CTGGAATGCA
TCCAAGGCTT TTTTACGACC TGTGCATAAC CGTTCCAACC TCACCGTGCT GACCGGCGTG
CAGGTTGATC AAGTGCTGCT GAACAACACC CGCGCCCGCG CAGTGAGAGC ATTTTGGCAA
GGCGCCTGGC ACGAGTTCGC TGCGCGCCGC GAGATCATCC TATGTGCAGG GGCGGTGGGT
TCGCCCGGCA TCCTGCAGCG CTCCGGCATT GGCCCGCGCA CGCTGCTGGA AACGCTCGGC
ATCGGCGTAC GGCACGATAT GCCCGGTGTC GGTGGCAATC TGCAAGACCA CCTGCAATTG
CGCCTGATCT ACCAGATCCG CAACACCAGA ACGCTCAACC AGATGGCCAA CAGCCTGTGG
GGCAAGATGG GTATGGGCCT GCGTTATCTC TACGACCGCA GCGGCCCGCT GGCCATGGCG
CCGAGCCAAC TTGGGGCGTT CGTGCGGTCC AGCCCGGAGC AGCTCACCGC CAACCTGCAA
TACCACGTAC AACCCCTGTC GCTGGAACGC TTCGGCGAGC CGCTGCACCG CTTCCCCGCC
TTCACCGCTT CGGTGTGCAA CCTGCGCCCT GCTAGCCGTG GGCGCATCGA TATCCGTAGC
TCGGACATGA ACAGCGCGCC ACTGATTGAC CCCAACTACC TCAGCGACCC TCAAGACCTG
CGCGTTGCCG CCGACGCCAT CCGTATCACA CGTCGCATCG TCCAGGCCCC TGCCCTCGCC
GCTTTCGATC CTCAGGAATA CCTGCCAGGC CCTGCCCTGC AAACCGAGGA GGACTTGTTC
GAAGCGGCAG GCAAGATCGG CACCACCATC TTCCATCCGG TCGGGACCTG CCGTATGGGC
AGCGGCCCGC TGGACGTTGT GGATAACCAG CTGCGTGTAC GCGGCATCCC CGGCCTGCGC
GTGGCGGATG CTTCAATCAT GCCGCAGATC ACCTCCGGCA ATACCTGTTC ACCCACCCTG
ATGATCGCCG AGAAGGCGGC CCAACTCATT CTCAAGGGAG CTGCTACCCA GACCTACCTG
AACGAAGACG CGTTACCGAC GCCCTGA
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| Protein sequence | MPSADSVFDY VIVGAGPAGC LLANRLSADP SCRVLLLEAG GRDNYPWIHI PVGYLYCIGN
PRTDWCFKTA AQIGLGGRSL GYPRGKVLGG CSSINGMIYM RGQAADYDHW AEQGNDGWAW
KDVLPLFKAS ENHFAGGSDH HGATGEWRVE RQRYSWPILD AFRDAAEQSG IAKVDDFNTG
DNQGCGYFQV NQRSGVRWNA SKAFLRPVHN RSNLTVLTGV QVDQVLLNNT RARAVRAFWQ
GAWHEFAARR EIILCAGAVG SPGILQRSGI GPRTLLETLG IGVRHDMPGV GGNLQDHLQL
RLIYQIRNTR TLNQMANSLW GKMGMGLRYL YDRSGPLAMA PSQLGAFVRS SPEQLTANLQ
YHVQPLSLER FGEPLHRFPA FTASVCNLRP ASRGRIDIRS SDMNSAPLID PNYLSDPQDL
RVAADAIRIT RRIVQAPALA AFDPQEYLPG PALQTEEDLF EAAGKIGTTI FHPVGTCRMG
SGPLDVVDNQ LRVRGIPGLR VADASIMPQI TSGNTCSPTL MIAEKAAQLI LKGAATQTYL
NEDALPTP
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