| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0053 |
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| Symbol | |
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| ID | 6109223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 55964 |
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| End bp | 56932 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619809 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001746928 |
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| Protein GI | 170719240 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0674011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTACAC AAAATGAAAC ATATACAAGC AGCGTTGTTC CTTACAGCCC TGACATATTG
GATGATTTGC CAATTGATGA TCAGCTGGCC GTAGAGTTTT TCGCAACAGC ACGTTGTGCC
AGTTTCAAAC AGGCTGCCCG AGGGCTCAAT GTGCCAGTGG TAGGCCTGCG GAAACGCTTG
GAGAAACTGG AAGAGCACAT TGGTGCTCCC GTGTTTGTCT ACAAACACAA CAAGCTTGCC
CTGACCCGCA CAGGCGAGAG GGTCAGCCAT TACCTGTGCC AGCTCTTCGG CCCAGACGGC
CTTGGCAAGT CCGGTGAAAA GGAAGTCCCC AGGCTTACCA TCGCGATCAC AGAGCCAGTG
CTGAACGACA TCGTAAACCG CGATCTAGTC GCCTACGTGC GTGATCATGC CGAAATGCAG
CTGGAAATCC ATTCAGAATG CACAACGCAG ATGCTTTCTG AGTGTGAAGT CGATGTGGGT
ATCGCTTTGG TGAGCCCAGA TGATAAAGGC GCGCTTGATC GCCATCCTAC GTATAGGTTT
GAAAGGCTTG GCCGGATTGG GCACGCCCTG TTCATTTCCA GCCGCTATTC AAGAAGCGTC
ACCCTTCCAG TGGAGAGCTT GGATTTGCAC AACTTCATGC TCGTTGTCCC TTGGGATGAA
GAGATCTTGG CGGGCTCACG AAAGTGGGCA TCGATAATGG CTGAGCATCA GGGCGGTACC
ACTCGGGTCA AGAGCTACAA CCTATCACGA GGCCTTGTCG TTGGCGGTGC GTGTATTGGA
GTGCTGCCCG ACTACAGCCG AAAACTGGAG AGAAATATCC TACCCGTGCC GGGTTTCCTG
GACGACCTGG AGGAGAAAGA TGTCTATCTT GTTATCAAAA CGAAGCTTGT CCGCAATCCG
CAGGTTTTGG AAATTCGAAG ATTGATCAAG AAGAGCTTCT TTGATAAGAA GGACTGGCTT
GTTCGGTAA
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| Protein sequence | MVTQNETYTS SVVPYSPDIL DDLPIDDQLA VEFFATARCA SFKQAARGLN VPVVGLRKRL
EKLEEHIGAP VFVYKHNKLA LTRTGERVSH YLCQLFGPDG LGKSGEKEVP RLTIAITEPV
LNDIVNRDLV AYVRDHAEMQ LEIHSECTTQ MLSECEVDVG IALVSPDDKG ALDRHPTYRF
ERLGRIGHAL FISSRYSRSV TLPVESLDLH NFMLVVPWDE EILAGSRKWA SIMAEHQGGT
TRVKSYNLSR GLVVGGACIG VLPDYSRKLE RNILPVPGFL DDLEEKDVYL VIKTKLVRNP
QVLEIRRLIK KSFFDKKDWL VR
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