Gene EcSMS35_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4928 
Symbol 
ID6143877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5043494 
End bp5045044 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content52% 
IMG OID641619731 
Producthypothetical protein 
Protein accessionYP_001746835 
Protein GI170681370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTT CTCATGAAAA TGCACTGCAA CAACGTTGCC AGCAAATTGT CACCAGCCCG 
GTACTTAGCC CGGAGCAGAA GCGCCATTTT CTGGCACTGG AAGCAGAAAA CAATCTGCCT
TACCCCGCGT TGCCTGCCGA AGCCCGCCGC GCGCTGGATG AGGGTGTAAT CTGCGATATG
TTTGAAGGTC ATGCGCCGTA CAAACCGCGC TATGTCTTAC CCGATTACGC CCGTTTTCTG
GCGAACGGTT CCGAATGGCT GGAGCTGGAA GGCGCGAAAG ATCTTGATGA CGCACTCTCT
CTGCTGACCA TTCTTTACCA CCACGTACCG TCGGTCACAT CGATGCCGGT CTACCTGGGG
CAACTGGATG CGTTGTTGCA ACCGTATGTT AGAATTCTAA CACAAGACGA GATCGATATT
CGAATAAAAC GTTTCTGGCG TTACCTCGAC AGAACCCTGC CAGACGCCTT TATGCACGCC
AATATCGGCC CGTCTGATTC GCCCATCACC CGTGCAATCT TACGTGCAGA TGCAGAGCTG
AAGCAGGTTT CACCAAACCT GACCTTTATC TACGATCCTG AAATCACCCC TGATGACCTG
CTGCTGGAAG TGGCGAAGAA CATCTGTGAA TGTAGCAAAC CGCACATCGC CAACGGTCCG
GTGCATGATA AAATTTTCAC AAAAGGGGGC TACGGGATTG TGAGCTGTTA CAACTCACTG
CCGCTGGCGG GTGGTGGCAG CACGCTGGTA CGCCTAAACC TGAAAGCCAT TGCCGAGCGC
AGTGAATCGC TGGAGGACTT CTTTACGCGC ACTCTACCGC ACTACTGCCA ACAGCAGATC
GCCATCATCG ATGCGCGGTG TGAATTCCTC TATCAACAAT CACACTTCTT TGAGAATAGC
TTCCTGGTGA AAGAAGGGCT GATTAACCCT GAACGTTTTG TGCCAATGTT TGGCATGTAC
GGACTGGCGG AAGCAGTTAA CTTACTGTGT GAGAAAGAAG GAATTGTCGC ACGTTACGGT
AAAGAAGCCA CCGCAAATGA AGTGGGTTAT CGCATCAGCG CGCAACTGGC GGAGTTTGTC
GCCAATACCC CTGTGAAATA TGGCTGGCAA AAACGCGCCA TGTTACACGC ACAGTCGGGG
ATCAGTTCCG ATATCGGCAC CACGCCGGGC GCGCGTTTAC CATATGGCGA TGAGCCAGAT
CCGATTACCC ATCTGCAAAC TGTCGCGCCG CATCATGCTT ATTATTATTC CGGCATCAGC
GACATTCTGA CGCTCGACGA AACCATCAAA CGTAATCCGC AGGCGCTGGT ACAGCTTTGC
CTCGGTGCCT TTAAAGCCGG AATGCGTGAA TTTACCGCCA ATGTCAGCGG TAACGATCTG
GTTCGCGTTA CCGGTTATAT GGTGCGTTTG TCGGATTTAG AAAAATATCG CGCCGAAGGT
TCACGCACCA ACACCACCTG GCTGGGAGAA GAAGCCGCAC GCAACACTCG TATTCTGGAA
CGTCAGCCGC GCGTGATAAG CCATGAACAG CAGATGCGCT TTAGTCAGTA A
 
Protein sequence
MPTSHENALQ QRCQQIVTSP VLSPEQKRHF LALEAENNLP YPALPAEARR ALDEGVICDM 
FEGHAPYKPR YVLPDYARFL ANGSEWLELE GAKDLDDALS LLTILYHHVP SVTSMPVYLG
QLDALLQPYV RILTQDEIDI RIKRFWRYLD RTLPDAFMHA NIGPSDSPIT RAILRADAEL
KQVSPNLTFI YDPEITPDDL LLEVAKNICE CSKPHIANGP VHDKIFTKGG YGIVSCYNSL
PLAGGGSTLV RLNLKAIAER SESLEDFFTR TLPHYCQQQI AIIDARCEFL YQQSHFFENS
FLVKEGLINP ERFVPMFGMY GLAEAVNLLC EKEGIVARYG KEATANEVGY RISAQLAEFV
ANTPVKYGWQ KRAMLHAQSG ISSDIGTTPG ARLPYGDEPD PITHLQTVAP HHAYYYSGIS
DILTLDETIK RNPQALVQLC LGAFKAGMRE FTANVSGNDL VRVTGYMVRL SDLEKYRAEG
SRTNTTWLGE EAARNTRILE RQPRVISHEQ QMRFSQ