Gene EcSMS35_4906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4906 
SymboldnaC 
ID6147056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5028571 
End bp5029308 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID641619709 
ProductDNA replication protein DnaC 
Protein accessionYP_001746816 
Protein GI170680779 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000177661 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG TTGGCGACCT GATGCAACGC CTGCAAAAAA TGATGCCTGC CCATATCAAA 
CCTGCGTTCA AAACGGGTGA AGAACTACTG GCCTGGCAGA AAGAACAAGG AGCGATCCGC
TCCGCCGCTC TCGAACGTGA AAATCGGGCG ATGAAAATGC AGCGCACCTT TAACCGCTCC
GGTATTCGTC CACTGCATCA GAACTGCTCC TTTGAGAACT ATCGCGTTGA GTGTGAAGGG
CAGATGAATG CGTTAAGCAA AGCGCGCCAG TATGTCGAAG AATTTGACGG CAACATCGCC
AGCTTCATCT TTTCTGGCAA GCCCGGAACC GGCAAAAACC ATCTGGCGGC GGCAATCTGC
AACGAACTGC TGCTACGCGG TAAATCCGTA TTGATCATCA CCGTGGCTGA TATTATGTCG
GCGATGAAAG ATACCTTCAG GAATAGCGGT ACCAGCGAAG AACAACTGCT TAGCGATCTG
AGCAACGTTG ATCTGCTGGT GATCGATGAG ATCGGCGTGC AGACCGAATC GAAATACGAA
AAAGTGATCA TCAACCAGAT CGTCGATCGC CGCTCTTCTT CCAAACGCCC AACCGGGATG
CTGACCAACA GTAATATGGA AGAGATGACC AAGTTGCTGG GCGAACGCGT GATGGACCGT
ATGCGCCTGG GTAACAGTTT GTGGGTGATC TTCAACTGGG ATAGCTACCG TAGCCGGGTA
ACGGGTAAAG AGTATTAA
 
Protein sequence
MKNVGDLMQR LQKMMPAHIK PAFKTGEELL AWQKEQGAIR SAALERENRA MKMQRTFNRS 
GIRPLHQNCS FENYRVECEG QMNALSKARQ YVEEFDGNIA SFIFSGKPGT GKNHLAAAIC
NELLLRGKSV LIITVADIMS AMKDTFRNSG TSEEQLLSDL SNVDLLVIDE IGVQTESKYE
KVIINQIVDR RSSSKRPTGM LTNSNMEEMT KLLGERVMDR MRLGNSLWVI FNWDSYRSRV
TGKEY