Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4906 |
Symbol | dnaC |
ID | 6147056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 5028571 |
End bp | 5029308 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619709 |
Product | DNA replication protein DnaC |
Protein accession | YP_001746816 |
Protein GI | 170680779 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000177661 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACG TTGGCGACCT GATGCAACGC CTGCAAAAAA TGATGCCTGC CCATATCAAA CCTGCGTTCA AAACGGGTGA AGAACTACTG GCCTGGCAGA AAGAACAAGG AGCGATCCGC TCCGCCGCTC TCGAACGTGA AAATCGGGCG ATGAAAATGC AGCGCACCTT TAACCGCTCC GGTATTCGTC CACTGCATCA GAACTGCTCC TTTGAGAACT ATCGCGTTGA GTGTGAAGGG CAGATGAATG CGTTAAGCAA AGCGCGCCAG TATGTCGAAG AATTTGACGG CAACATCGCC AGCTTCATCT TTTCTGGCAA GCCCGGAACC GGCAAAAACC ATCTGGCGGC GGCAATCTGC AACGAACTGC TGCTACGCGG TAAATCCGTA TTGATCATCA CCGTGGCTGA TATTATGTCG GCGATGAAAG ATACCTTCAG GAATAGCGGT ACCAGCGAAG AACAACTGCT TAGCGATCTG AGCAACGTTG ATCTGCTGGT GATCGATGAG ATCGGCGTGC AGACCGAATC GAAATACGAA AAAGTGATCA TCAACCAGAT CGTCGATCGC CGCTCTTCTT CCAAACGCCC AACCGGGATG CTGACCAACA GTAATATGGA AGAGATGACC AAGTTGCTGG GCGAACGCGT GATGGACCGT ATGCGCCTGG GTAACAGTTT GTGGGTGATC TTCAACTGGG ATAGCTACCG TAGCCGGGTA ACGGGTAAAG AGTATTAA
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Protein sequence | MKNVGDLMQR LQKMMPAHIK PAFKTGEELL AWQKEQGAIR SAALERENRA MKMQRTFNRS GIRPLHQNCS FENYRVECEG QMNALSKARQ YVEEFDGNIA SFIFSGKPGT GKNHLAAAIC NELLLRGKSV LIITVADIMS AMKDTFRNSG TSEEQLLSDL SNVDLLVIDE IGVQTESKYE KVIINQIVDR RSSSKRPTGM LTNSNMEEMT KLLGERVMDR MRLGNSLWVI FNWDSYRSRV TGKEY
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