| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4899 |
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| Symbol | |
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| ID | 6146469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 5018936 |
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| End bp | 5019799 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619702 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001746809 |
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| Protein GI | 170682954 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTATA GCATCGATAT CATCTCCTGC ATTACCGAAC GGTTTATGGC GTTAACAGCC
ACTGAAAAGC GTATCGCACA ATTTATTCTT GATGACGTCT CTGCCGCAGT AGAGTTGCCA
ATTGCTGAGC TGGCACGGTT AACGCAAACC AGTCAGGCGT CGGTGACGCG TTTTGCCCGT
GCACTGGGGT GCAAAGATGT CCGCGAGTTG AAAGTCAAAC TGGCGCAGTC ACTGGCTGTC
GGGCAGCGGT TTATTCTCGA TGTACCGGAT CTTGACGGTG TTCAGGGGAT CTACGAAGCG
ATTATTAGCG TGCTGGAGAC GCATCGTCGT TCGCTGGATA TGAATGCCAT CAGCCAGGCT
GTAAGCTGGT TAAGTCAGGC GCGGCAAATT CTTGCGTTAG GAACTGGCGG CGGTTCCACT
ATCTGTTCAC AGGAGATTCA GTACCGTTTA TTCCGTCTGG GGCTACCGGT GGTCAGTCAG
AATGATGCCC TGATGATGAG AATGATGTGC TCGGCAGTCA TGCCGCAGGA TGTGGTGATT
GTGCTTTCGC TGGGCGGTTA TACACCGGAA ATCATCGAAA GTGCGGCAAT CGCCCGTCAG
TATGGCGCGC GTGTTATTGC CATTACGCCA GCACAAACAC CGCTGGCGGA ACAGGTGGAT
CTGGTATTGC CGTTACTGGT TCAGGAAAGT GATTACATCT TTAAGCCCAC CCCTTCCCGC
TACGCGATGT TAGCCATGGT CGATGTACTG GCAACAGAAC TGGCAATGGC AAATAAAGCG
CAGGCGAAAG ATCGCCTGCG GCGGATAAAA CTCGTGTTAG ACAGCCACCG TGGGGGCGCT
AACCGCCAGC CACTTGGCGA TTAG
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| Protein sequence | MAYSIDIISC ITERFMALTA TEKRIAQFIL DDVSAAVELP IAELARLTQT SQASVTRFAR
ALGCKDVREL KVKLAQSLAV GQRFILDVPD LDGVQGIYEA IISVLETHRR SLDMNAISQA
VSWLSQARQI LALGTGGGST ICSQEIQYRL FRLGLPVVSQ NDALMMRMMC SAVMPQDVVI
VLSLGGYTPE IIESAAIARQ YGARVIAITP AQTPLAEQVD LVLPLLVQES DYIFKPTPSR
YAMLAMVDVL ATELAMANKA QAKDRLRRIK LVLDSHRGGA NRQPLGD
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