Gene EcSMS35_4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4742 
Symbol 
ID6146358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4841167 
End bp4842267 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID641619557 
Productputative permease 
Protein accessionYP_001746665 
Protein GI170681521 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000002134 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.891327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAATCA TAAGATATCT GGTGCGGGAG ACGCTCAAAA GCCAGCTGGC GATACTCTTC 
ATCTTGCTTT TGATCTTCTT CTGTCAAAAG TTAGTGAGGA TCCTCGGCGC AGCGGTTGAC
GGCGATATTC CGGCGAATCT GGTGCTCTCC CTTCTCGGGT TGGGCGTGCC GGAAATGGCG
CAGCTTATCC TGCCATTAAG CCTGTTCCTC GGGCTGCTGA TGACGCTGGG CAAACTGTAT
ACCGAAAGTG AAATTACGGT AATGCATGCC TGCGGCCTGA GCAAAGCGGT GCTGGTGAAA
GCGGCAATGA TCCTTGCGGT ATTCACGGCA ATCGTCGCGG CGGTTAACGT GATGTGGGCG
GGACCGTGGT CATCGCGTCA TCAGGATGAA GTGTTAGCAG AAGCGAAAGC GAACCCTGGC
ATGGCGGCGC TTGCGCAAGG GCAATTCCAG CAAGCGACTA ATGGCAGCTC GGTGCTGTTC
ATCGAAAGCG TTGACGGCAG CGATTTCAAA GATGTGTTCC TCGCGCAAAT TCGACCAAAA
GGTAATGCAC GACCTTCTGT GGTGGTGGCC GATTCCGGAC ATTTAACCCA GCTGCGCGAC
GGCTCCCAGG TCGTCACTCT CAACCAGGGA ACGCGCTTCG AAGGCACTGC ACTGTTACGT
GATTTCCGCA TTACGGATTT CCAGGATTAT CAGGCGATCA TTGGTCACCA GGCGGTGGCG
CTCGACCCGA ACGATACCGA CCAGATGGAC ATGCGCACAT TGTGGAACAC TGACACCGAT
CGTGCTCGCG CAGAACTGAA CTGGCGTATC ACGTTGGTGT TCACCGTGTT TATGATGGCA
CTTATGGTCG TACCGCTGAG CGTGGTTAAC CCGCGTCAGG GACGCGTACT ATCGATGCTG
CCAGCCATGC TGCTGTATCT GTTGTTCTTC CTGATCCAGA CCTCCCTGAA ATCGAACGGC
GGTAAAGGTA AGCTGGACCC GACGCTGTGG ATGTGGACCG TTAACCTGAT TTATCTGGCT
TTGGCGATTG TTCTCAACCT TTGGGACACC GTGCCGGTCC GCCGCCTGCG CGCCAGTTTT
TCGCGTAAAG GAGCGGTGTG A
 
Protein sequence
MIIIRYLVRE TLKSQLAILF ILLLIFFCQK LVRILGAAVD GDIPANLVLS LLGLGVPEMA 
QLILPLSLFL GLLMTLGKLY TESEITVMHA CGLSKAVLVK AAMILAVFTA IVAAVNVMWA
GPWSSRHQDE VLAEAKANPG MAALAQGQFQ QATNGSSVLF IESVDGSDFK DVFLAQIRPK
GNARPSVVVA DSGHLTQLRD GSQVVTLNQG TRFEGTALLR DFRITDFQDY QAIIGHQAVA
LDPNDTDQMD MRTLWNTDTD RARAELNWRI TLVFTVFMMA LMVVPLSVVN PRQGRVLSML
PAMLLYLLFF LIQTSLKSNG GKGKLDPTLW MWTVNLIYLA LAIVLNLWDT VPVRRLRASF
SRKGAV