Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4734 |
Symbol | argF |
ID | 6144756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4832383 |
End bp | 4833387 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619549 |
Product | ornithine carbamoyltransferase subunit I |
Protein accession | YP_001746657 |
Protein GI | 170683240 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.488433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.892607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGGT TTTATCATAA GCATTTCCTG AAATTACTCG ATTTCACGCC AGCTGAACTC AACAGCCTGC TGCAGTTAGC CGCGAAGCTG AAAGCCGATA AGAAAAGCGG TAAAGAAGAA GCCAAACTCA CTGGTAAAAA CATCGCGCTC ATCTTCGAAA AAGACTCGAC CCGTACCCGA TGCTCTTTCG AAGTTGCCGC ATATGACCAG GGTGCTCGTG TTACTTATCT CGGCCCAAGC GGCAGCCAAA TTGGTCATAA AGAGTCGATT AAAGACACTG CCCGCGTGCT TGGTCGCATG TATGACGGTA TTCAGTATCG CGGCTATGGT CAGGAGATTG TCGAAACACT GGCGGAATAC GCTGGCGTGC CGGTATGGAA CGGCCTGACC AATGAGTTTC ACCCCACGCA GCTGCTGGCG GATCTCCTCA CCATGCAGGA GCATTTGCCC GGCAAAACGT TCAACGAAAT GACGCTGGTC TATGCAGGTG ACGCACGTAA CAACATGGGC AATTCGATGC TCGAAGCTGC AGCGCTTACC GGTCTGGATT TGCGTCTGGT CGCGCCACAG GCATGCTGGC CGGAAGCTGC GCTGGTTACG GAATGCCGCG CCCTGGCACA ACAAAATGGC GGGAATATTA CGCTGACGGA AGATGTAGCT AAAGGAGTTG AAGGTGCTGA CTTTATCTAT ACCGATGTAT GGGTGTCGAT GGGTGAAGCA AAAGAGAAAT GGGCTGAACG CATTGCATTG CTGCGTGATT ATCAAGTGAA CAGCAAGATG ATGCAGTTGA CCGGTAACCC GGAGGTCAAA TTCCTCCACT GCCTGCCCGC GTTTCATGAC GACCAAACGA CGCTTGGCAA AAAAATGGCG GAAGAGTTTG GCCTACATGG CGGAATGGAA GTGACTGATG AGGTCTTCGA ATCTGCCGCC AGCATTGTAT TTGATCAGGC GGAAAACCGC ATGCATACCA TCAAAGCGGT GATGGTCGCG ACGCTCAGTA AATAA
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Protein sequence | MSGFYHKHFL KLLDFTPAEL NSLLQLAAKL KADKKSGKEE AKLTGKNIAL IFEKDSTRTR CSFEVAAYDQ GARVTYLGPS GSQIGHKESI KDTARVLGRM YDGIQYRGYG QEIVETLAEY AGVPVWNGLT NEFHPTQLLA DLLTMQEHLP GKTFNEMTLV YAGDARNNMG NSMLEAAALT GLDLRLVAPQ ACWPEAALVT ECRALAQQNG GNITLTEDVA KGVEGADFIY TDVWVSMGEA KEKWAERIAL LRDYQVNSKM MQLTGNPEVK FLHCLPAFHD DQTTLGKKMA EEFGLHGGME VTDEVFESAA SIVFDQAENR MHTIKAVMVA TLSK
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