Gene EcSMS35_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4682 
Symbol 
ID6144208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4780584 
End bp4781222 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID641619498 
ProductTetR family transcriptional regulator 
Protein accessionYP_001746606 
Protein GI170681145 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000014918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTG ATACCAGTCA CGCACAAAAC CTGAAGGAAA AATTGCTGCT ATGCGCGGTT 
AATGAATTTG CCGAATATGG TTACGAAGGG GCCAGAGTAG ATAATATTGT TAAGGCAGCA
GGGTGCAGTA AACAGACGGT TTATCACCAC TTTGGTAATA AAGAAAATTT GTTTATTGAA
GTACTGGAAT ATACCTGGAA CGATATTCGC GAAAAAGAGA GAGAGCTTGA CATTTCAGGG
CTTTCGCCGG TTATTGCGAT CGAGAAAATA ATTGATTTTA CTTGGGATTA TTACATCAAT
AACCCGTGGT TTTTAAAAAT TGTCCATAGT GAAAACCAAA GTAAGGGTGT GCATTATAAA
AAATCAAAAC GCCTCGCTGA AATTAACCAT GCACATTTGC AGTCAATGGC TTCATTATTA
GAAGAAGGGC AGCGGCAGAA AACCTTTAAG AAATATATTG ATCCCTTACA AATCAACATT
AATATCGCCG CACTGGGTGC ATATTATTTA ATAAACCAGT ACACACTGGG GATGGTTTAT
CACATTAGCA TGGTTTCACC TGAGGCTTTG GAAGCCAGAC GCAGGGTGAT CAAAGAGACC
ATCCTGAGCT GGCTTTTGGT GAACCCTGCC CGTGGGTAA
 
Protein sequence
MYLDTSHAQN LKEKLLLCAV NEFAEYGYEG ARVDNIVKAA GCSKQTVYHH FGNKENLFIE 
VLEYTWNDIR EKERELDISG LSPVIAIEKI IDFTWDYYIN NPWFLKIVHS ENQSKGVHYK
KSKRLAEINH AHLQSMASLL EEGQRQKTFK KYIDPLQINI NIAALGAYYL INQYTLGMVY
HISMVSPEAL EARRRVIKET ILSWLLVNPA RG