Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4682 |
Symbol | |
ID | 6144208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4780584 |
End bp | 4781222 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641619498 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001746606 |
Protein GI | 170681145 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000014918 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTTG ATACCAGTCA CGCACAAAAC CTGAAGGAAA AATTGCTGCT ATGCGCGGTT AATGAATTTG CCGAATATGG TTACGAAGGG GCCAGAGTAG ATAATATTGT TAAGGCAGCA GGGTGCAGTA AACAGACGGT TTATCACCAC TTTGGTAATA AAGAAAATTT GTTTATTGAA GTACTGGAAT ATACCTGGAA CGATATTCGC GAAAAAGAGA GAGAGCTTGA CATTTCAGGG CTTTCGCCGG TTATTGCGAT CGAGAAAATA ATTGATTTTA CTTGGGATTA TTACATCAAT AACCCGTGGT TTTTAAAAAT TGTCCATAGT GAAAACCAAA GTAAGGGTGT GCATTATAAA AAATCAAAAC GCCTCGCTGA AATTAACCAT GCACATTTGC AGTCAATGGC TTCATTATTA GAAGAAGGGC AGCGGCAGAA AACCTTTAAG AAATATATTG ATCCCTTACA AATCAACATT AATATCGCCG CACTGGGTGC ATATTATTTA ATAAACCAGT ACACACTGGG GATGGTTTAT CACATTAGCA TGGTTTCACC TGAGGCTTTG GAAGCCAGAC GCAGGGTGAT CAAAGAGACC ATCCTGAGCT GGCTTTTGGT GAACCCTGCC CGTGGGTAA
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Protein sequence | MYLDTSHAQN LKEKLLLCAV NEFAEYGYEG ARVDNIVKAA GCSKQTVYHH FGNKENLFIE VLEYTWNDIR EKERELDISG LSPVIAIEKI IDFTWDYYIN NPWFLKIVHS ENQSKGVHYK KSKRLAEINH AHLQSMASLL EEGQRQKTFK KYIDPLQINI NIAALGAYYL INQYTLGMVY HISMVSPEAL EARRRVIKET ILSWLLVNPA RG
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