| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4669 |
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| Symbol | sgaE |
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| ID | 6145109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4768482 |
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| End bp | 4769168 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619485 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_001746593 |
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| Protein GI | 170681480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGC TAAAACAGCA GGTATTTGAA GCCAACATGG ATCTGCCGCG CTATGGGCTG
GTGACCTTTA CCTGGGGCAA CGTCAGCGCC ATTGACCGCG AACGCGGGCT GGTGGTGATC
AAGCCCAGCG GCGTTGCCTA CGAAACCATG AAAGCGGCCG ATATGGTGGT GGTTGATATG
AGCGGCAAGG TGGTGGAAGG GGAATATCGC CCGTCTTCCG ACACCGCGAC GCATCTCGAA
CTCTACCGTC GTTATCCGTC GCTTGGCGGC ATTGTCCATA CCCACTCCAC TCATGCTACC
GCATGGGCGC AGGCGGGGCT GGCGATCCCG GCGTTAGGCA CTACGCACGC CGACTACTTC
TTTGGTGATA TCCCGTGTAC GCGCGGATTA AGCGAAGAAG AGGTGCAGGG TGAGTACGAA
CTGAACACCG GCAAAGTGAT TATCGAAACG CTGGGTGACG CCGAGCCGTT GCATACGCCG
GGAATTGTGG TGTATCAGCA CGGGCCGTTT GCCTGGGGGA AAGATGCCCA CGATGCGGTG
CATAACGCGG TGGTGATGGA AGAAGTGGCG AAAATGGCGT GGATTGCGCG CAGTATAAAC
CCGCAACTGA ATCACATCGA CAGCTATCTT ATGAATAAAC ACTTCATGCG TAAGCATGGT
CCCAACGCTT ATTACGGGCA GAAGTAA
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| Protein sequence | MQKLKQQVFE ANMDLPRYGL VTFTWGNVSA IDRERGLVVI KPSGVAYETM KAADMVVVDM
SGKVVEGEYR PSSDTATHLE LYRRYPSLGG IVHTHSTHAT AWAQAGLAIP ALGTTHADYF
FGDIPCTRGL SEEEVQGEYE LNTGKVIIET LGDAEPLHTP GIVVYQHGPF AWGKDAHDAV
HNAVVMEEVA KMAWIARSIN PQLNHIDSYL MNKHFMRKHG PNAYYGQK
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