| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4633 |
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| Symbol | orn |
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| ID | 6145670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4736265 |
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| End bp | 4736810 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619449 |
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| Product | oligoribonuclease |
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| Protein accession | YP_001746560 |
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| Protein GI | 170681955 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000387491 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0592166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCCA ATGAAAACAA CCTGATTTGG ATCGATCTTG AGATGACCGG TCTGGATCCC
GAGCGCGATC GCATTATTGA GATTGCCACG CTGGTGACCG ATGCCAACCT GAATATTCTG
GCAGAAGGGC CGACCATTGC AGTACATCAG TCCGATGAAC AGCTGGCGCT GATGGATGAC
TGGAACGTGC GCACCCATAC CGCCAGCGGG CTGGTGGAGC GCGTGAAAGC GAGCACGATG
GGCGATCGTG AAGCTGAACT GGCAACGCTC GAATTCTTAA AACAGTGGGT GCCTGCGGGA
AAATCGCCGA TTTGTGGTAA CAGCATCGGT CAGGACCGTC GCTTCCTGTT TAAATACATG
CCGGAGCTGG AAGCCTACTT CCACTACCGT TATCTCGATG TCAGCACCCT GAAAGAGCTG
GCGCGCCGCT GGAAGCCGGA AATTCTTGAT GGTTTTACCA AGCAGGGGAC GCATCAGGCG
ATGGATGATA TCCGTGAATC GGTGGCGGAG CTGGCTTACT ACCGCGAGCA TTTTATCAAG
CTGTAA
|
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| Protein sequence | MSANENNLIW IDLEMTGLDP ERDRIIEIAT LVTDANLNIL AEGPTIAVHQ SDEQLALMDD
WNVRTHTASG LVERVKASTM GDREAELATL EFLKQWVPAG KSPICGNSIG QDRRFLFKYM
PELEAYFHYR YLDVSTLKEL ARRWKPEILD GFTKQGTHQA MDDIRESVAE LAYYREHFIK
L
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