| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4599 |
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| Symbol | |
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| ID | 6146213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4699920 |
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| End bp | 4701377 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619415 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001746527 |
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| Protein GI | 170682504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.148198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC CCTCACAGCC GCGCGCGATA TACTATATCG TGGCGATCCA AATCTGGGAG
TACTTCAGTT TTTACGGCAT GCGTGCCTTA CTCATTCTCT ATCTCACCCA TCAGCTTGGT
TTTGATGATA ACCATGCCAT CAGCCTGTTC AGCGCATATG CTTCTCTGGT TTACGTTACC
CCTATTCTCG GCGGCTGGCT TGCCGACCGC CTGCTCGGCA ACCGCACTGC AGTGATTGCC
GGCGCGCTGT TAATGACCCT TGGCCATGTG GTGCTGGGCA TTGATACAAA TTCAACCTTT
AGCCTGTATC TGGCGCTGGC AATCATTATT TGTGGCTACG GTTTATTCAA ATCAAACATC
AGCTGTTTGC TTGGCGAGCT CTACGACGAG AACGATCATC GACGTGATGG CGGTTTTTCG
CTGCTGTATG CTGCGGGCAA TATCGGTTCT ATCGCAGCCC CCATCGCCTG CGGCCTGGCT
GCTCAGTGGT ATGGATGGCA TGTTGGCTTT GCCCTTGCGG GAGGCGGCAT GTTTATCGGT
TTGTTGATTT TCTTAAGTGG TCATCGTCAT TTCCAGTCCA CGCGTAGTAT GGATAAAAAA
GCGCTCACTA GCGTCAAATT TGCCTTACCA GTATGGACCT GGTTAGTGGT GATGCTCTGT
TTAGCCCCAG TATTTTTTAC CCTGCTGCTG GAGAACGACT GGTCCGGATA TTTGCTGGCG
ATCGTTTGCC TCATTGCCGC ACAAATCATT GCCCGCATGA TGATCAAATT CCCCGAACAC
CGCCGTGCTC TTTGGCAAAT TGTATTGTTG ATGTTTGTCG GGACGTTGTT CTGGGTACTG
GCACAACAGG GCGGCAGTAC CATCAGCTTG TTTATCGATC GCTTTGTGAA TCGTCAGGCA
TTCAATATTG AAGTACCTAC AGCACTATTC CAGTCGGTGA ATGCTATTGC GGTGATGCTC
GCTGGGGTTG TTCTGGCCTG GCTGGCGTCG CCAGAAAGCC GCGGCAATTC AGCATTGCGC
GTCTGGCTGA AGTTTGCCTT TGGCTTACTG CTGATGGCTT GTGGCTTTAT GTTGCTGGCA
TTTGATGCCC GACATGCAGC GGCTGGCGGT CAAGCGTCAA TGGGCGTGAT GATATCCGGG
CTGGCGCTAA TGGGCTTTGC TGAACTCTTT ATTGACCCAG TGGCGATTGC GCAAATCACG
CGTCTGAAAA TGTCTGGCGT ATTAACCGGT ATTTATATGC TGGCAACAGG CGCGGTCGCC
AACTGGCTGG CAGGCGTCGT GGCACAGCAG ACGACAGAGT CGCAAATTAG CGGTATGGCA
ATTGCCGCTT ACCAGCGATT CTTTTCTCAG ATGGGAGAGT GGACGTTGGC TTGTGTCGCG
ATCATCGTGG TATTGGCCTT TGCTACCCGT TTTCTGTTTA GCACGCCGAC GAATATGATA
CAGGAGAGCA ACGATTAA
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| Protein sequence | MKTPSQPRAI YYIVAIQIWE YFSFYGMRAL LILYLTHQLG FDDNHAISLF SAYASLVYVT
PILGGWLADR LLGNRTAVIA GALLMTLGHV VLGIDTNSTF SLYLALAIII CGYGLFKSNI
SCLLGELYDE NDHRRDGGFS LLYAAGNIGS IAAPIACGLA AQWYGWHVGF ALAGGGMFIG
LLIFLSGHRH FQSTRSMDKK ALTSVKFALP VWTWLVVMLC LAPVFFTLLL ENDWSGYLLA
IVCLIAAQII ARMMIKFPEH RRALWQIVLL MFVGTLFWVL AQQGGSTISL FIDRFVNRQA
FNIEVPTALF QSVNAIAVML AGVVLAWLAS PESRGNSALR VWLKFAFGLL LMACGFMLLA
FDARHAAAGG QASMGVMISG LALMGFAELF IDPVAIAQIT RLKMSGVLTG IYMLATGAVA
NWLAGVVAQQ TTESQISGMA IAAYQRFFSQ MGEWTLACVA IIVVLAFATR FLFSTPTNMI
QESND
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