| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4592 |
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| Symbol | dcuS |
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| ID | 6146536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4694995 |
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| End bp | 4696626 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641619408 |
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| Product | sensory histidine kinase DcuS |
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| Protein accession | YP_001746520 |
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| Protein GI | 170682025 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATT CATTGCCCTA CCGTATGTTA CGCAAACGTC CGATGAAATT GAGTACCACT
GTGATCTTAA TGGTCAGCGC GGTACTGTTC TCGGTGCTAT TGGTGGTGCA TCTGATTTAC
TTCTCGCAAA TCAGTGATAT GACGCGAGAC GGGCTAGCTA ACAAGGCACT GGCAGTAGCG
CGTACCCTCG CCGACTCGCC GGAAATCCGG CAGGGCTTGC AGAAAAAACC GCAGGAGAGC
GGCATCCAGG CCATCGCGGA AGCCGTGCGC AAACGCAACG ATCTGCTATT TATTGTCGTT
ACCGATATGC AAAGTCTTCG CTACTCGCAT CCTGAAGCCC AGCGTATTGG TCAGCCATTT
AAAGGTGATG ACATCCTTAA AGCGCTGAAT GGCGAAGAAA ATGTCGCTAT CAATCGCGGT
TTTCTGGCGC AGGCTTTACG CGTATTTACC CCCATCTACG ATGAAAATCA TAAACAAATT
GGCGTGGTGG CGATCGGCCT TGAGTTAAGT CGCGTGACCC AACAGATCAA TGACAGTCGC
TGGAGCATCA TCTGGTCGGT ATTATTTGGC ATGCTGGTCG GGCTGATTGG CACCTGCATT
CTGGTTAAGG TACTGAAAAA AATCCTTTTC GGCCTGGAAC CCTACGAAAT CTCCACGCTG
TTTGAGCAAC GCCAGGCCAT GTTGCAGTCT ATCAAAGAAG GCGTCGTTGC CGTGGACGAT
CGCGGCGAAG TCACGCTGAT CAACGATGCC GCACAAGAAT TGCTGAATTA CCGTAAGTCG
CAGGACGATG AGAAGCTGTC GACGCTAAGC CACGCGTGGT CACAGGTAGT AGATGTCTCG
GAAGTGTTAC GCGACGGTAC CCCGCGCCGC GACGAAGAGA TTACGATTAA AGACCGGCTA
TTACTGATCA ACACCGTTCC GGTGCGCAGT AATGGCGTTA TCATCGGTGC CATTTCAACC
TTCAGGGACA AAACTGAAGT ACGTAAACTG ATGCAGCGAC TCGATGGTCT GGTCAACTAT
GCTGACGCAC TTCGTGAACG ATCCCACGAA TTTATGAATA AATTGCACGT GATTCTCGGA
TTATTGCATC TGAAGAGTTA TAAGCAGTTG GAAGATTACA TTCTCAAAAC AGCCAATAAC
TATCAGGAAG AGATTGGCTC TCTGCTGGGT AAGATCAAAT CTCCGGTTAT CGCTGGTTTT
TTAATCAGCA AGATTAACCG CGCGACCGAT TTAGGCCATA CGCTGATTTT AAACAGTGAA
AGCCAGCTGC CAGACAGCGG TAGTGAGGAT CAGGTCGCGA CGCTGATTAC CACGTTGGGA
AATCTGATAG AAAACGCGCT GGAGGCATTA GGGCCGGAAC CCGGAGGCGA AATTAGCGTA
ACATTGCACT ACCGTCACGG CTGGCTGCAC TGTGAAGTTA ACGATGATGG ACCGGGGATC
GCACCCGACA AAATCGATCA CATTTTTGAC AAAGGTGTCT CGACAAAAGG AAGCGAGCGA
GGCGTCGGTT TAGCACTTGT CAAACAACAG GTAGAAAATC TCGGCGGCAG CATCGCCGTG
GAATCGGAAC CCGGGATTTT CACACAATTT TTTGTCCAGA TACCCTGGGA CGGGGAGAGG
TCGAACAGAT GA
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| Protein sequence | MRHSLPYRML RKRPMKLSTT VILMVSAVLF SVLLVVHLIY FSQISDMTRD GLANKALAVA
RTLADSPEIR QGLQKKPQES GIQAIAEAVR KRNDLLFIVV TDMQSLRYSH PEAQRIGQPF
KGDDILKALN GEENVAINRG FLAQALRVFT PIYDENHKQI GVVAIGLELS RVTQQINDSR
WSIIWSVLFG MLVGLIGTCI LVKVLKKILF GLEPYEISTL FEQRQAMLQS IKEGVVAVDD
RGEVTLINDA AQELLNYRKS QDDEKLSTLS HAWSQVVDVS EVLRDGTPRR DEEITIKDRL
LLINTVPVRS NGVIIGAIST FRDKTEVRKL MQRLDGLVNY ADALRERSHE FMNKLHVILG
LLHLKSYKQL EDYILKTANN YQEEIGSLLG KIKSPVIAGF LISKINRATD LGHTLILNSE
SQLPDSGSED QVATLITTLG NLIENALEAL GPEPGGEISV TLHYRHGWLH CEVNDDGPGI
APDKIDHIFD KGVSTKGSER GVGLALVKQQ VENLGGSIAV ESEPGIFTQF FVQIPWDGER
SNR
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