| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4588 |
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| Symbol | fumB |
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| ID | 6145226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4690644 |
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| End bp | 4692290 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619404 |
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| Product | fumarate hydratase class I, anaerobic |
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| Protein accession | YP_001746516 |
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| Protein GI | 170681722 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA AACCCTTTAT CTACCAGGCA CCTTTCCCGA TGGGGAAAGA CAATACCGAA
TACTATCTAC TCACTTCCGA TTACGTTAGC GTTGCCGACT TCGACGGTGA AACCATCCTG
AAAGTGGAAC CAGAAGCCCT GACTCTGCTG GCGCAGCAAG CCTTTCACGA TGCTTCTTTC
ATGCTCCGCC CGGCACACCA GAAACAGGTT GCGGCTATTC TTCACGATCC AGAAGCCAGC
GAAAACGACA AGTACGTGGC GCTGCAATTC TTAAGAAACT CCGAAATCGC CGCCAAAGGC
GTGCTGCCGA CCTGCCAGGA TACCGGCACC GCGATCATCG TCGGTAAAAA AGGTCAGCGC
GTGTGGACCG GTGGCGGTGA TGAAGAAGCG CTGTCGAAAG GCGTCTATAA CACCTATATC
GAAGATAACC TGCGCTATTC ACAGAACGCG CCGCTGGACA TGTATAAAGA GGTCAACACC
GGCACGAACC TGCCTGCGCA AATCGACCTG TACGCGGTAG ATGGCGATGA GTACAAATTC
CTCTGTGTCT CTAAAGGCGG CGGCTCTGCC AACAAAACGT ATCTCTACCA GGAAACCAAA
GCCCTGCTGA CGCCCGGCAA ACTGAAAAAC TTCCTCGTCG AGAAAATGCG TACCCTCGGT
ACTGCAGCCT GCCCGCCGTA CCATATCGCG TTTGTGATTG GCGGTACGTC TGCGGAAACC
AACCTGAAAA CCGTCAAGTT AGCAAGCGCT CACTATTACG ATGAACTGCC GACGGAAGGG
AACGAACATG GTCAGGCGTT CCGCGATATC CAGCTGGAAC AGGAACTGCT GGAAGAGGCC
CAGAAACTCG GTCTTGGCGC GCAGTTTGGC GGTAAATACT TCGCGCACGA CATCCGCGTT
ATCCGTCTGC CACGTCACGG CGCATCCTGC CCGGTAGGCA TGGGCGTCTC CTGCTCCGCT
GACCGTAACA TTAAAGCGAA AATCAACCGC GAAGGTATCT GGATCGAAAA ACTGGAACAC
AATCCAGGCC AGTACATTCC GGAAGAACTG CGCAAGGCCG GTGAAGGCGA AGCGGTGAAA
GTTGACCTTA ACCGCCCGAT GAAAGAGATC CTCGCCCAGC TTTCGCAATA CCCGGTATCC
ACCCGCTTGT CGCTCACCGG CACCATTATC GTGGGTCGCG ATATTGCACA CGCCAAGCTG
AAAGAGCTGA TTGACGCCGG TAAAGAACTG CCGCAGTACA TCAAAGATCA CCCGATCTAC
TACGCGGGTC CGGCGAAAAC CCCTGCCGGT TATCCATCAG GTTCACTTGG CCCAACCACC
GCAGGTCGTA TGGACTCCTA CGTGGATCTG CTGCAATCCC ACGGCGGCAG CATGATCATG
CTGGCGAAAG GTAACCGCAG TCAGCAGGTT ACTGACGCGT GCCATAAACA CGGCGGCTTC
TACCTCGGTA GCATCGGCGG TCCGGCGGCG GTACTGGCGC AGCAGAGCAT CAAGCATTTG
GAATGCGTCG CTTATCCGGA GCTGGGTATG GAAGCTATCT GGAAAATCGA AGTAGAAGAT
TTCCCGGCGT TTATCCTGGT CGATGACAAA GGTAACGACT TCTTCCAGCA AATCGTCAAC
AAACAGTGCG CGAACTGCAC TAAGTAA
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| Protein sequence | MSNKPFIYQA PFPMGKDNTE YYLLTSDYVS VADFDGETIL KVEPEALTLL AQQAFHDASF
MLRPAHQKQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG VLPTCQDTGT AIIVGKKGQR
VWTGGGDEEA LSKGVYNTYI EDNLRYSQNA PLDMYKEVNT GTNLPAQIDL YAVDGDEYKF
LCVSKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSAET
NLKTVKLASA HYYDELPTEG NEHGQAFRDI QLEQELLEEA QKLGLGAQFG GKYFAHDIRV
IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH NPGQYIPEEL RKAGEGEAVK
VDLNRPMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KELIDAGKEL PQYIKDHPIY
YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACHKHGGF
YLGSIGGPAA VLAQQSIKHL ECVAYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIVN
KQCANCTK
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