Gene EcSMS35_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4580 
SymboladiC 
ID6147288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4680646 
End bp4681983 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content55% 
IMG OID641619396 
Productarginine:agmatin antiporter 
Protein accessionYP_001746508 
Protein GI170683422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.721219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGG ATGCTGATGC TCACAAAGTG GGCTTAATCC CCGTCACCCT GATGGTGTCG 
GGGAATATTA TGGGGTCAGG TGTTTTTCTG TTACCTGCAA ACCTGGCCTC CACTGGCGGG
ATTGCCATTT ATGGATGGTT GGTGACGATT ATCGGTGCGC TGGGGCTCTC GATGGTATAC
GCCAAAATGT CGTTCCTCGA CCCAAGTCCT GGTGGTTCTT ACGCTTACGC CCGCCGCTGC
TTTGGCCCGT TTCTCGGTTA TCAAACCAAC GTCCTCTACT GGCTGGCCTG CTGGATCGGC
AATATCGCCA TGGTGGTCAT TGGCGTAGGA TATTTAAGTT ACTTCTTCCC GATTCTGAAA
GATCCACTGG TATTAACCAT CACCTGCGTC GTGGTGCTGT GGATCTTCGT CCTGCTGAAC
ATTGTCGGTC CGAAAATGAT CACCCGCGTG CAGGCCGTTG CCACCGTGCT GGCGCTGATC
CCCATCGTCG GGATTGCCGT ATTTGGCTGG TTCTGGTTCC GTGGTGAAAC CTATATGGCG
GCATGGAACG TCAGCGGCCT GGGCACCTTC GGCGCGATTC AAAGTACCCT TAACGTTACG
CTGTGGTCGT TCATCGGTGT GGAAAGTGCC TCCGTTGCCG CAGGTGTGGT GAAAAACCCG
AAACGCAACG TCCCTATCGC CACCATTGGT GGGGTATTGA TTGCCGCCGT TTGCTATGTG
CTCTCCACCA CCGCGATTAT GGGGATGATC CCTAATGCCG CACTGCGCGT TTCTGCCTCG
CCATTCGGTG ATGCCGCACG GATGGCGTTG GGTGACACCG CCGGGGCCAT TGTTTCCTTC
TGCGCAGCTG CGGGTTGCTT AGGTTCACTG GGCGGCTGGA CGTTGCTGGC GGGTCAAACG
GCGAAAGCCG CTGCCGATGA CGGACTGTTC CCACCGATTT TTGCCCGTGT AAATAAAGCG
GGCACGCCAG TGGCGGGGCT GATTATCGTC GGTATTTTGA TGACCATCTT CCAGCTCAGT
AGCATTTCGC CAAACGCGAC TAAAGAGTTC GGTCTGGTGT CTTCCGTGTC GGTCATCTTT
ACACTGGTGC CATATCTTTA CACCTGTGCG GCGTTACTGC TGCTCGGCCA CGGTCACTTT
GGTAAAGCAC GCCCGGCATA TCTGGCAGTG ACTACCATTG CCTTCCTCTA CTGCATCTGG
GCCGTGGTGG GGTCCGGGGC GAAAGAGGTT ATGTGGTCAT TTGTCACCCT AATGGTCATC
ACCGCCATGT ATGCGCTGAA TTACAACCGG CTGCATAAAA ACCCGTATCC CTTAGATGCA
CCAATAAGCA AAGATTAA
 
Protein sequence
MSSDADAHKV GLIPVTLMVS GNIMGSGVFL LPANLASTGG IAIYGWLVTI IGALGLSMVY 
AKMSFLDPSP GGSYAYARRC FGPFLGYQTN VLYWLACWIG NIAMVVIGVG YLSYFFPILK
DPLVLTITCV VVLWIFVLLN IVGPKMITRV QAVATVLALI PIVGIAVFGW FWFRGETYMA
AWNVSGLGTF GAIQSTLNVT LWSFIGVESA SVAAGVVKNP KRNVPIATIG GVLIAAVCYV
LSTTAIMGMI PNAALRVSAS PFGDAARMAL GDTAGAIVSF CAAAGCLGSL GGWTLLAGQT
AKAAADDGLF PPIFARVNKA GTPVAGLIIV GILMTIFQLS SISPNATKEF GLVSSVSVIF
TLVPYLYTCA ALLLLGHGHF GKARPAYLAV TTIAFLYCIW AVVGSGAKEV MWSFVTLMVI
TAMYALNYNR LHKNPYPLDA PISKD