| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4555 |
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| Symbol | rpiR |
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| ID | 6147049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4657710 |
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| End bp | 4658600 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641619371 |
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| Product | DNA-binding transcriptional repressor RpiR |
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| Protein accession | YP_001746483 |
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| Protein GI | 170681425 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT CAGAGTTTGA TTCAGCGCTT CCGAACGGTA TCGGGTTAGC GCCTTACCTG
CGAATGAAGC AGGAAGGAAT GACAGAAAAC GAAAGCCGCA TCGTGGAGTG GTTACTCAAA
CCCGGTAACC TGAGTTGTGC ACCCGCAATT AAAGATGTCG CAGAAGCTCT GGCGGTATCT
GAAGCGATGA TCGTTAAGGT ATCAAAGCTG CTGGGGTTTA GCGGCTTTCG TAACTTACGC
AGTGCGCTGG AAGATTATTT TTCTCAGTCA GAACAAGTAT TGCCTTCCGA GTTGGCTTTT
GATGAAGCGC CGCAGGATGT GGTGAATAAG GTATTTAACA TCACTTTACG CACCATTATG
GAAGGTCAGT CGATCGTCAA CGTTGATGAG ATCCACCGTG CCGCCCGCTT TTTCTATCAG
GCCAGACAGC GGGATTTGTA CGGTGCCGGA GGATCAAATG CTATCTGTGC TGATGTACAG
CACAAGTTTT TACGCATTGG CGTACGCTGC CAGGCCTATC CGGACGCTCA CATCATGATG
ATGTCTGCTT CGTTGTTACA GGAAGGAGAT GTGGTGCTGG TGGTGACCCA TTCCGGGCGA
ACCAGTGATG TAAAAGCGGC TGTAGAACTG GCAAAAAAGA ACGGGGCAAA GATTATTTGT
ATAACGCATA GCTACCATTC ACCGATAGCG AAGCTGGCCG ATTATATTAT TTGCTCACCG
GCCCCGGAAA CACCGTTATT AGGTCGTAAT GCCTCGGCAA GAATATTACA ACTAACTTTG
CTGGACGCGT TTTTTGTCTC TGTCGCCCAG CTCAACATTG AACAAGCTAA TATTAATATG
CAAAAAACCG GCGCAATTGT TGATTTCTTC TCACCAGGCG CGCTGAAATA A
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| Protein sequence | MSQSEFDSAL PNGIGLAPYL RMKQEGMTEN ESRIVEWLLK PGNLSCAPAI KDVAEALAVS
EAMIVKVSKL LGFSGFRNLR SALEDYFSQS EQVLPSELAF DEAPQDVVNK VFNITLRTIM
EGQSIVNVDE IHRAARFFYQ ARQRDLYGAG GSNAICADVQ HKFLRIGVRC QAYPDAHIMM
MSASLLQEGD VVLVVTHSGR TSDVKAAVEL AKKNGAKIIC ITHSYHSPIA KLADYIICSP
APETPLLGRN ASARILQLTL LDAFFVSVAQ LNIEQANINM QKTGAIVDFF SPGALK
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