Gene EcSMS35_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4540 
SymbolgltP 
ID6147026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4640539 
End bp4641852 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content53% 
IMG OID641619356 
Productglutamate/aspartate:proton symporter 
Protein accessionYP_001746468 
Protein GI170684035 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TAAAATTCAG CCTGGCCTGG CAGATTCTGT TTGCTATGGT GCTGGGCATT 
CTCCTGGGAA GCTACCTGCA CTACCATAGC GACAGTCGCG ACTGGCTGGT CGTCAATTTG
CTCTCTCCGG CGGGTGATAT CTTCATCCAT CTGATCAAAA TGATTGTTGT GCCGATTGTG
ATCTCCACGC TGGTGGTGGG TATCGCGGGT GTTGGTGATG CCAAACAGCT CGGGCGTATT
GGCGCGAAAA CCATTATTTA CTTCGAGGTG ATCACCACCG TCGCCATCAT TTTGGGGATT
ACTCTGGCGA ACGTCTTCCA GCCCGGTGCC GGGGTGGATA TGTCGCAGCT GGCGACCGTC
GATATCTCGA AATATCAGAG CACTACGGAA GCGGTACAAA GCAGTTCCCA CGGCATTATG
GGCACGATTT TGTCGCTGGT GCCGACGAAC ATTGTGGCGT CGATGGCGAA AGGCGAAATG
CTGCCGATCA TCTTCTTCTC GGTGCTGTTT GGTCTGGGGC TTTCATCCCT GCCCGCGACG
CATCGTGAAC CGCTGGTGAC CGTGTTCCGC TCCATCTCTG AAACCATGTT TAAAGTGACT
CACATGGTGA TGCGTTATGC ACCGGTGGGT GTGTTTGCGC TGATTGCGGT GACGGTGGCT
AACTTTGGTT TCTCTTCTCT GTGGCCACTG GCGAAACTGG TGCTGCTGGT GCATTTCGCC
ATTCTGTTCT TCGCGCTGGT AGTGCTGGGA ATTGTGGCGC GCCTGTGCGG GTTAAGCGTC
TGGATCCTGA TTCGTATTCT GAAAGATGAG CTGATTCTGG CGTACTCCAC TGCCAGTTCT
GAAAGCGTGC TGCCGCGAAT TATTGAGAAG ATGGAAGCCT ACGGTGCACC GGCGTCGATC
ACCAGTTTCG TGGTGCCGAC CGGTTACTCT TTTAACCTTG ATGGTTCGAC GCTGTATCAA
AGTATTGCCG CTATTTTCAT CGCGCAGTTG TATGGCATTG ACCTGTCCAT CTGGCAGGAA
ATCATTCTGG TGCTGACGCT GATGGTGACC TCGAAAGGGA TTGCTGGCGT GCCGGGCGTG
TCGTTTGTGG TGCTGCTGGC AACGCTGGGT AGCGTAGGTA TTCCGCTGGA AGGTCTGGCA
TTTATTGCCG GTGTTGACCG TATCCTCGAT ATGGCGCGTA CTGCGCTGAA CGTGGTGGGT
AATGCGCTGG CGGTGCTGGT GATTGCCAAG TGGGAACACA AATTTGACCG TAAGAAAGCG
CTGGCTTATG AGCGCGAAGT GCTGGGCAAA TTTGATAAAA CTGCGGATCA ATAA
 
Protein sequence
MKNIKFSLAW QILFAMVLGI LLGSYLHYHS DSRDWLVVNL LSPAGDIFIH LIKMIVVPIV 
ISTLVVGIAG VGDAKQLGRI GAKTIIYFEV ITTVAIILGI TLANVFQPGA GVDMSQLATV
DISKYQSTTE AVQSSSHGIM GTILSLVPTN IVASMAKGEM LPIIFFSVLF GLGLSSLPAT
HREPLVTVFR SISETMFKVT HMVMRYAPVG VFALIAVTVA NFGFSSLWPL AKLVLLVHFA
ILFFALVVLG IVARLCGLSV WILIRILKDE LILAYSTASS ESVLPRIIEK MEAYGAPASI
TSFVVPTGYS FNLDGSTLYQ SIAAIFIAQL YGIDLSIWQE IILVLTLMVT SKGIAGVPGV
SFVVLLATLG SVGIPLEGLA FIAGVDRILD MARTALNVVG NALAVLVIAK WEHKFDRKKA
LAYEREVLGK FDKTADQ