Gene EcSMS35_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4529 
SymbolactP 
ID6146251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4629297 
End bp4630946 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content55% 
IMG OID641619345 
Productacetate permease 
Protein accessionYP_001746457 
Protein GI170682571 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG TTCTGACGGC GCTTGCCGCC ACACTCCCTT TCGCAGCTAA CGCCGCGGAT 
GCTATTAGCG GGGCCGTAGA GCGCCAGCCA ACAAACTGGC AGGCGATTAT TATGTTCCTG
ATTTTCGTCG TGTTTACGCT CGGCATTACC TACTGGGCGT CAAAACGCGT ACGTTCGCGT
AATGACTACT ACACCGCAGG CGGCAATATC ACCGGTTTTC AGAACGGGCT GGCGATTGCC
GGGGACTATA TGTCCGCCGC CTCATTCTTG GGGATCTCCG CGCTGGTGTT TACCTCCGGC
TATGACGGGC TGATCTACTC GTTGGGCTTC CTGGTGGGCT GGCCAATCAT TCTGTTCCTG
ATTGCCGAAC GTCTGCGTAA CCTCGGTCGC TACACCTTTG CCGATGTGGC CTCTTACCGT
CTGAAACAAG GGCCGATTCG TATTCTTTCG GCCTGTGGTT CTCTGGTGGT GGTGGCGCTT
TACCTTATCG CCCAGATGGT AGGTGCAGGT AAACTCATCG AGCTGCTGTT TGGCCTTAAC
TATCACATTG CGGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTCCT GTTCGGCGGC
ATGCTGGCGA CCACCTGGGT ACAGATTATC AAAGCCGTTC TGTTGCTGTT CGGTGCCAGC
TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAACAATCT GTTCAGCGAA
GCGATGGCGG TACACCCGAA AGGTGTCGAC ATCATGAAGC CGGGCGGGCT GGTGAAAGAT
CCTATCTCCG CGCTCTCTTT GGGGCTAGGA CTGATGTTTG GTACGGCTGG CTTGCCGCAT
ATTCTGATGC GCTTCTTTAC GGTCAGCGAT GCCCGCGAAG CACGTAAGAG CGTGTTCTAC
GCCACCGGAT TTATGGGCTA CTTCTACATC CTGACCTTTA TTATCGGCTT CGGCGCAATC
ATGCTGGTTG GTGCGAATCC GGAATATAAA GACGCGGCGG GCCATCTGAT TGGTGGTAAC
AACATGGCAG CAGTTCACCT GGCGAATGCA GTGGGTGGCA ACCTGTTCCT CGGCTTTATT
TCAGCGGTTG CTTTCGCCAC CATTCTTGCG GTGGTTGCGG GTCTGACGCT GGCGGGCGCA
TCGGCGGTGT CTCACGACCT GTACGCTAAC GTCTTCAAAA AAGGTGCGAC CGAACGTGAA
GAGCTGCGGG TATCGAAAAT CACCGTACTG ATCCTCGGTG TGATTGCCAT TATCCTCGGC
GTGCTGTTTG AGAATCAGAA CATCGCCTTT ATGGTGGGGC TGGCGTTTGC CATCGCGGCG
AGCTGTAACT TCCCGATCAT TCTGCTTTCC ATGTACTGGT CGAAACTGAC TACCCGTGGC
GCGATGCTGG GCGGCTGGTT AGGACTGATT ACTGCGGTGG TGCTGATGAT CCTCGGCCCG
ACGATTTGGG TACAGATCCT CGGTCACGAA AAAGCCATCT TCCCGTATGA ATACCCGGCG
CTGTTCTCTA TCAGCGTGGC ATTCCTCGGC ATCTGGTTCT TCTCGGCAAC CGATAACTCA
GCGGAAGGCG CGCGTGAGCG TGAACTGTTC CGTGCGCAGT TTATCCGTTC CCAGACCGGC
TTTGGCGTTG AGCAAGGCCG CGCGCATTAA
 
Protein sequence
MKRVLTALAA TLPFAANAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR 
NDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL
IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN
YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFSE
AMAVHPKGVD IMKPGGLVKD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY
ATGFMGYFYI LTFIIGFGAI MLVGANPEYK DAAGHLIGGN NMAAVHLANA VGGNLFLGFI
SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFKKGATERE ELRVSKITVL ILGVIAIILG
VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLI TAVVLMILGP
TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGARERELF RAQFIRSQTG
FGVEQGRAH