Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4521 |
Symbol | ssb2 |
ID | 6143470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4621713 |
End bp | 4622249 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641619337 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_001746449 |
Protein GI | 170682295 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCA GAGGCGTAAA CAAGGTTATT CTCGTTGGTA ATCTGGGTCA GGACCCGGAA GTACGCTACA TGCCAAATGG TGGCGCTGTT GCCAACATTA CGCTGGCTAC TTCCGAATCC TGGCGTGATA AAGCGACCGG CGAGATGAAA GAGCAGACTG AATGGCACCG CGTTGTGCTG TTCGGCAAAC TGGCAGAAGT AGCCAGCGAA TATCTGCGTA AAGGTTCTCA GGTTTATATC GAAGGTCAGC TGCGTACCCG CAAATGGACC GATCAATCCG GTCAGGATCG CTACACCACA GAAGTCGTGG TGAACGTTGG CGGCACCATG CAGATGCTGG GTGGTCGTCA GGGTGGTGGC GCTCCGGCAG GTGGCAATAT CGGTGGTGGT CAGCCGCAGG GCGGTTGGGG TCAGCCTCAG CAGCCGCAGG GTGGCAATCA GTTCAGCGGC GGCGCGCAGT CTCGCCCGCA GCAGTCCGCT CCGGCAGCGC CGTCTAACGA GCCGCCGATG GACTTTGATG ACGACATTCC GTTCTGA
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Protein sequence | MASRGVNKVI LVGNLGQDPE VRYMPNGGAV ANITLATSES WRDKATGEMK EQTEWHRVVL FGKLAEVASE YLRKGSQVYI EGQLRTRKWT DQSGQDRYTT EVVVNVGGTM QMLGGRQGGG APAGGNIGGG QPQGGWGQPQ QPQGGNQFSG GAQSRPQQSA PAAPSNEPPM DFDDDIPF
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