| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4506 |
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| Symbol | dinF |
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| ID | 6143547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4605345 |
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| End bp | 4606670 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619322 |
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| Product | DNA-damage-inducible SOS response protein |
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| Protein accession | YP_001746434 |
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| Protein GI | 170682064 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCC TCACTTCATC TGATAAAGCG CTCTGGCATC TCGCCTTACC CATGATTTTC
TCCAATATCA CCGTTCCGTT GCTGGGACTG GTCGATACGG CGGTAATTGG TCATCTTGAT
AGTCCGGTTT ATTTGGGCGG CGTGGCGGTT GGTGCAACGG CGACCAGCTT TCTCTTTATG
CTGTTGCTGT TTTTACGCAT GAGCACCACC GGGCTGACTG CGCAGGCTTA TGGTGCCAAA
AATCCTCAGG CATTAGCCCG TGCGCTGGTG CAACCGTTGC TGTTGGCGTT GGGGGCTGGG
GCGTTAATTG CGCTGCTGCG TACGCCGATT ATCGATCTGG CGCTGCATAT TGTTGGCGGC
AGCGAAGCGG TGCTAGAACA GGCGCGACGC TTTCTTGAAA TCCGCTGGTT AAGTGCACCG
GCGTCGCTGG CGAATCTGGT ATTACTTGGT TGGTTACTCG GTGTGCAATA TGCCCGTGCG
CCAGTAATTT TGTTAGTGGT CGGCAATATC CTCAACATTG TGCTGGATGT CTGGCTGGTG
ATGGGGCTGC ATATGAACGT GCAGGGCGCG GCGCTGGCGA CGGTTATTGC GGAATATGCA
ACATTGCTGA TTGGTCTGCT AATGGTGCGT AAAATCCTCA AACTACGCGG AATCTCCGGC
GAAATGCTGA AAACTGCCTG GCGAGGAAAC TTCCGTCACT TGCTGGCGCT TAACCGCGAT
ATCATGCTGC GCTCGCTGTT GTTGCAACTC TGTTTCGGCG CGATCACCGT ACTTGGCGCG
CGACTGGGGA GTGACATTAT CGCTGTTAAC GCGGTTCTGA TGACGTTACT CACCTTTACC
GCCTATGCGC TGGATGGTTT TGCCTACGCG GTTGAAGCGC ATTCCGGTCA GGCGTACGGT
GCGCGCGATG GTAGCCAGTT ACTGGATGTC TGGCGGGCAG CGTGCCGCCA GTCGGGGATT
GTAGCGTTAC TGTTTTCGGT GGTTTATTTG CTGGCAGGGG AACACATCAT TGCGTTGCTG
ACGTCGTTAA CCCAGATTCA GCAGCTGGCT GACCGCTATC TTATCTGGCA GGTGATTTTG
CCGTTGGTCG GCGTCTGGTG TTATCTGCTC GACGGCATGT TTATAGGTGC AACGCGCGCC
GCCGAAATGC GTAACAGTAT GGCGGTGGCC GCCGCAGGTT TTGCGCTGAC GCTCCTTACG
CTGCCGTGGC TGGGGAATCA TGGTTTGTGG CTGGCATTAA CCGTCTTTCT GGCGTTACGC
GGGCTTTCTC TGGCGGCTAT CTGGCGGCGT CACTGGCGCA ACGGTACCTG GTTTGCCGCA
ACGTGA
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| Protein sequence | MAFLTSSDKA LWHLALPMIF SNITVPLLGL VDTAVIGHLD SPVYLGGVAV GATATSFLFM
LLLFLRMSTT GLTAQAYGAK NPQALARALV QPLLLALGAG ALIALLRTPI IDLALHIVGG
SEAVLEQARR FLEIRWLSAP ASLANLVLLG WLLGVQYARA PVILLVVGNI LNIVLDVWLV
MGLHMNVQGA ALATVIAEYA TLLIGLLMVR KILKLRGISG EMLKTAWRGN FRHLLALNRD
IMLRSLLLQL CFGAITVLGA RLGSDIIAVN AVLMTLLTFT AYALDGFAYA VEAHSGQAYG
ARDGSQLLDV WRAACRQSGI VALLFSVVYL LAGEHIIALL TSLTQIQQLA DRYLIWQVIL
PLVGVWCYLL DGMFIGATRA AEMRNSMAVA AAGFALTLLT LPWLGNHGLW LALTVFLALR
GLSLAAIWRR HWRNGTWFAA T
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