Gene EcSMS35_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4446 
Symbolnfi 
ID6142741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4543321 
End bp4543992 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID641619266 
Productendonuclease V 
Protein accessionYP_001746382 
Protein GI170681451 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000793274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTCG CGTCATTACG CGCTCAACAA ATTGAACTGG CTTCTTCTGT GATCCGCGAG 
GATCGACTCG ATAAAGATCC GCCGGATCTG ATCGCCGGAG CCGATGTCGG ATTTGAGCAG
GGCGGAGAAG TGACGCGAGC GGCGATGGTG CTGCTGAAAT ACCCCTCGCT TGAGCTGGTG
GAGTATAAAG TGGCCCGCAT CGCCACCACC ATGCCTTACA TTCCAGGTTT TCTCTCCTTC
CGCGAATATC CTGCGCTGCT GGCAGCGTGG GAGATGCTGT CACAAAAGCC GGATTTAGTG
TTTGTCGATG GTCACGGGAT CTCGCATCCT CGCCGTCTTG GCGTTGCCAG CCACTTTGGT
TTGCTGGTGG ATGTGCCGAC CATTGGCGTG GCGAAAAAAC GGCTCTGCGG TAAATTCGAA
CCGCTCTCCA GCGAACCGGG CGCGCTGGCC CCACTGATGG ATAAAGGCGA GCAGCTGGCC
TGGGTCTGGC GCAGCAAAGC GCGCTGTAAC CCGTTGTTTA TCGCTACCGG TCATCGGGTC
AGCGTGGACA GCGCGCTGGC GTGGGTACAA CGCTGCATGA AAGGCTATCG TCTGCCGGAG
CCAACGCGCT GGGCGGACGC GGTGGCCTCG GAACGTCCGG CGTTCGTGCG CTATACAGCA
AATCAGCCCT AA
 
Protein sequence
MDLASLRAQQ IELASSVIRE DRLDKDPPDL IAGADVGFEQ GGEVTRAAMV LLKYPSLELV 
EYKVARIATT MPYIPGFLSF REYPALLAAW EMLSQKPDLV FVDGHGISHP RRLGVASHFG
LLVDVPTIGV AKKRLCGKFE PLSSEPGALA PLMDKGEQLA WVWRSKARCN PLFIATGHRV
SVDSALAWVQ RCMKGYRLPE PTRWADAVAS ERPAFVRYTA NQP