Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4414 |
Symbol | murI |
ID | 6146847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4511321 |
End bp | 4512109 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619235 |
Product | glutamate racemase |
Protein accession | YP_001746359 |
Protein GI | 170680254 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000386576 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00203904 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCTGGTGT TTGACTCCGG CGTCGGTGGG TTGTCGGTCT ATGACGAGAT CCGGCATCTC TTACCGGATC TCCATTACAT TTATGCTTTC GATAACGTCG CTTTCCCGTA TGGCGAAAAA AGCGAAGCGT TTATTGTTGA GCGAGTGGTG GCAATTGTCA CCGCAGTGCA AAAACGTTAT CCCCTTGCGC TGGCTGTGGT CGCTTGCAAC ACTGCCAGTA CCGTTTCACT TCCTGCATTA CGCGAAAAGT TCGACTTCCC GGTTGTTGGT GTCGTGCCGG CGATTAAACC TGCTGCACGT CTGACGGCAA ATGGCATTGT CGGATTACTG GCAACCCGCG GAACAGTTAA ACGTTCTTAT ACTCATGAGC TGATCGCGCG TTTCGCTAAT GAATGCCAGA TAGAAATGCT GGGCTCGGCA GAGATGGTTG AGTTGGCTGA AGCGAAGCTG CATGGCGAAG ATGTTTCTCT GGATGCGCTA AAACGTATCT TGCGTCCGTG GTTAAGAATG AAAGAGCCGC CAGATACCGT TGTACTGGGG TGTACCCATT TCCCTCTACT ACAAGAAGAA CTGTTACAGG TGCTGCCAGA GGGAACCCGG CTGGTGGATT CTGGCGCAGC GATTGCTCGC CGAACGGCCT GGCTGTTAGA ACATGAAGCC CCGGATGCAA AATCTGCCGA TGCGAATATT GCCTTTTGTA TGGCAATGAC GCCAGAAGCT GAACAATTAT TGCCCGTTTT ACAGCGTTAC GGCTTCGAAA CGCTCGAAAA ACTGGCAGTT TTAGGCTGA
|
Protein sequence | MLVFDSGVGG LSVYDEIRHL LPDLHYIYAF DNVAFPYGEK SEAFIVERVV AIVTAVQKRY PLALAVVACN TASTVSLPAL REKFDFPVVG VVPAIKPAAR LTANGIVGLL ATRGTVKRSY THELIARFAN ECQIEMLGSA EMVELAEAKL HGEDVSLDAL KRILRPWLRM KEPPDTVVLG CTHFPLLQEE LLQVLPEGTR LVDSGAAIAR RTAWLLEHEA PDAKSADANI AFCMAMTPEA EQLLPVLQRY GFETLEKLAV LG
|
| |