| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4412 |
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| Symbol | trmA |
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| ID | 6145990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4507994 |
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| End bp | 4509094 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641619233 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_001746357 |
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| Protein GI | 170681986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00710465 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0138898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCCG AACACCTTCC AACAGAACAG TATGAAGCGC AGTTAGCCGA AAAAGTGGTA
CGTTTGCAAA GTATGATGGC ACCGTTTTCT GACCTGGTTC CGGAAGTGTT TCGCTCGCCG
GTCAGTCATT ACCGGATGCG TGCGGAGTTC CGCATCTGGC ACGATGGCGA TGACCTGTAT
CACATCATTT TCGATCAACA AACCAAAAGC CGCATCCGCG TGGATAGCTT CCCCGCCGCC
AGTGAACTTA TCAACCAGTT GATGACGGCG ATGATTGCGG GTGTGCGTAA TAATCCCGTT
CTGCGCCACA AGTTGTTCCA GATTGATTAC CTCACCACGC TGAGTAATCA GGCGGTGGTT
TCCCTGCTGT ACCATAAGAA GCTGGATGAT GAGTGGCGTC AGGAAGCGGA AGCCCTGCGC
GACGCACTGC GAGCGCAGAA TCTGAATGTG CATCTGATTG GTCGGGCAAC GAAAACCAAA
ATCGAGCTGG ATCAAGATTA CATCGATGAA CGTCTGCCGG TCGCAGGGAA AGAGATGATC
TACCGTCAGG TAGAAAACAG CTTTACCCAG CCGAACGCGG CGATGAATAT TCAGATGCTG
GAATGGGCGC TGGACGTAAC CAAAGGCTCA AAAGGCGATT TACTGGAGCT GTACTGCGGC
AACGGTAACT TTTCATTAGC ACTGGCGCGC AATTTTGATC GGGTATTAGC CACCGAAATC
GCTAAGCCGT CGGTCGCTGC CGCGCAATAC AACATTGCCG CTAACCATAT TGATAACGTA
CAAATTATTC GTATGGCGGC AGAAGAATTT ACTCAGGCGA TGAATGGCGT ACGCGAGTTT
AACCGCCTGC AAGGGATCGA TTTAAAGAGT TATCAGTGCG AAACCATTTT TGTCGACCCA
CCACGCAGCG GTCTGGACGG TGAAACCGAG AAAATGGTGC AGGCGTATCC ACGTATTCTG
TATATCTCCT GCAATCCGGA AACGTTATGC AAGAATCTGG AAACATTAAG TCAGACGCAC
AAGGTCGAAC GTCTGGCTCT GTTTGATCAG TTCCCCTACA CGCACCATAT GGAGTGCGGC
GTATTACTGA CCGCGAAGTA A
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| Protein sequence | MTPEHLPTEQ YEAQLAEKVV RLQSMMAPFS DLVPEVFRSP VSHYRMRAEF RIWHDGDDLY
HIIFDQQTKS RIRVDSFPAA SELINQLMTA MIAGVRNNPV LRHKLFQIDY LTTLSNQAVV
SLLYHKKLDD EWRQEAEALR DALRAQNLNV HLIGRATKTK IELDQDYIDE RLPVAGKEMI
YRQVENSFTQ PNAAMNIQML EWALDVTKGS KGDLLELYCG NGNFSLALAR NFDRVLATEI
AKPSVAAAQY NIAANHIDNV QIIRMAAEEF TQAMNGVREF NRLQGIDLKS YQCETIFVDP
PRSGLDGETE KMVQAYPRIL YISCNPETLC KNLETLSQTH KVERLALFDQ FPYTHHMECG
VLLTAK
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