Gene EcSMS35_4409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4409 
SymboloxyR 
ID6144393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4504313 
End bp4505230 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content56% 
IMG OID641619229 
ProductDNA-binding transcriptional regulator OxyR 
Protein accessionYP_001746353 
Protein GI170679918 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.386018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0576457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC GTGATCTTGA GTACCTGGTG GCATTGGCTG AACACCGCCA TTTTCGGCGT 
GCGGCAGATT CCTGCCACGT TAGCCAGCCG ACGCTTAGCG GGCAAATTCG TAAGCTGGAA
GATGAGCTGG GCGTGATGTT GCTGGAGCGG ACCAGCCGTA AAGTATTGTT CACCCAGGCG
GGAATGCTGC TGGTGGATCA GGCGCGTACC GTGCTGCGTG AGGTGAAAGT CCTTAAAGAG
ATGGCAAGCC AGCAGGGCGA GACGATGTCC GGGCCGCTGC ATATTGGTTT GATTCCCACG
GTTGGACCGT ATCTGCTACC GCATATTATC CCGATGCTGC ACCAGACCTT TCCAAAGCTG
GAAATGTATC TGCATGAAGC ACAGACCCAC CAGTTACTGG CGCAACTGGA CAGCGGCAAG
CTCGATTGCG TGATCCTCGC GCTGGTGAAA GAGAGCGAAG CATTCATTGA AGTGCCGTTG
TTTGATGAGC CAATGTTGCT GGCTATCTAT GAAGATCACC CGTGGGCGAA CCGCGAATGC
GTACCGATGG CCGATCTGGC AGGAGAAAAA CTGCTGATGC TGGAAGATGG TCACTGTTTG
CGCGATCAGG CAATGGGGTT CTGTTTTGAA GCCGGGGCGG ATGAAGATAC ACACTTCCGC
GCGACCAGCC TGGAGACGCT GCGCAACATG GTGGCGGCAG GTAGCGGAAT CACTTTACTG
CCTGCGCTGG CTGTGCCGCC GGAACGCAAA CGCGATGGGG TTGTTTATCT GCCGTGCATT
AAGCCGGAAC CACGCCGCAC TATTGGCCTG GTTTATCGTC CTGGCTCACC ACTGCGCAGC
CGCTATGAGC AGCTGGCAGA GGCCATCCGC GCAAGAATGG ATGGCCATTT CGATAAAGTG
TTAAAACAGG CGGTTTAA
 
Protein sequence
MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA 
GMLLVDQART VLREVKVLKE MASQQGETMS GPLHIGLIPT VGPYLLPHII PMLHQTFPKL
EMYLHEAQTH QLLAQLDSGK LDCVILALVK ESEAFIEVPL FDEPMLLAIY EDHPWANREC
VPMADLAGEK LLMLEDGHCL RDQAMGFCFE AGADEDTHFR ATSLETLRNM VAAGSGITLL
PALAVPPERK RDGVVYLPCI KPEPRRTIGL VYRPGSPLRS RYEQLAEAIR ARMDGHFDKV
LKQAV