Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4400 |
Symbol | |
ID | 6143065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4493650 |
End bp | 4494501 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619222 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001746346 |
Protein GI | 170682151 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.370971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.467233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCACG ACGTCAGCTA TCTGCTCTCC CGCCTGATCA ACGGCCCGCT GTCCCTGCGC CAGATTTACT TTGCCAGCAG TAACGGCCCG GTGCCCGATC TTGCGTATCA GGTCGATTTT CCACGACTGG AAATTGTGCT GGAAGGTGAG TTTGTTGATA CCGGCGCTGG AGCAACGTTA GTTCCCGGCG ATGTGCTGTA CGTTCCCGCT GGTGGCTGGA ATTTTCCACA ATGGCAAGCC CCCGCCACTA CCTTTAGCGT GCTGTTTGGC AAACAGCAAC TCGGCTTCAG CGTCGTGCAA TGGGATGGCA AACAATATCA AAATCTGGCG AAGCAACACG TCGCCCGACG CGGCCCGCGC ATTGGTTCTT TTCTGCTACA AACGCTCAAT GAAATGCAAA TGCAGCCGCA GGAGCAGCAA ACGGCAAGGC TTATCGTCGC CAGCCTGCTT AGCCACTGCC GCGATTTGCT CGGCAGCCAA ATCCAGACCG CCTCACGTAG CCAGGCTCTA TTCGAAGCTA TTCGCGATTA TATCGACGAA CGCTATGCCT CCGCGCTTAC CCGCGAATCT GTCGCACAGG CATTCTATAT TTCGCCAAAT TACCTCTCGC ACCTGTTTCA AAAAACGGGG GCCATTGGTT TTAACGAATA CCTGAATCAC ACGCGACTGG AGCACGCTAA GACGTTATTG AAAGGCTATG ACCTGAAGGT AAAAGAAGTG GCGCACGCCT GCGGCTTTGT CGACAGCAAC TACTTCTGCC GTCTGTTTCG TAAAAATACC GAACGCTCAC CGTCGGAATA TCGTCGGCAG TACCACAGCC AACTGACAGA AAAACCGACT ACTCCAGAAT AA
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Protein sequence | MYHDVSYLLS RLINGPLSLR QIYFASSNGP VPDLAYQVDF PRLEIVLEGE FVDTGAGATL VPGDVLYVPA GGWNFPQWQA PATTFSVLFG KQQLGFSVVQ WDGKQYQNLA KQHVARRGPR IGSFLLQTLN EMQMQPQEQQ TARLIVASLL SHCRDLLGSQ IQTASRSQAL FEAIRDYIDE RYASALTRES VAQAFYISPN YLSHLFQKTG AIGFNEYLNH TRLEHAKTLL KGYDLKVKEV AHACGFVDSN YFCRLFRKNT ERSPSEYRRQ YHSQLTEKPT TPE
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