| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4384 |
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| Symbol | tsx2 |
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| ID | 6142961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4471225 |
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| End bp | 4472085 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641619205 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_001746329 |
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| Protein GI | 170682215 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.605519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTATAA AAAAGCACGG GATAGCTTTA TCGATTCTAT TAATACCTTG CATTGGAAAC
GCTCAGGAAA TTAAAAGTGA GGAAGGCTGG TTACATCAAA GCTTGAATGT CATTGGTCGC
ACAGACTCTC GCTTTGGCCC AAGGCTGACT AACGACCTCT ACCCTGAATA TACTGTAGCA
GGAAGAAAAG ACTGGTTTGA TTTTTATGGT TATGTTGATC TACCAAAATT CTTTGGCGTC
GGCAGTCACT ATGATGTTGG GATCTGGGAT GAGGGCTCAC CACTATTTAC GGAAATAGAA
CCTCGGTTTT CCATTGACAA ATTGACCGGA TTAAATCTTG CGTTCGGCCC TTTTAAAGAA
TGGTTCATTG CAAACAACTA TGTCTATGAT ATGGGTGACA ACCAGTCATC CCGGCAAAGT
ACATGGTATA TGGGGCTTGG TACAGATATC GACACGGGTC TACCAATTAA GCTTTCTGCC
AATATATACG CCAAGTATCA GTGGCAAAAC TATGGTGCCG CTAATGAAAA TGAATGGGAC
GGATATCGAT TCAAAATAAA ATATAGCATT CCTCTTACCC ATTTATTCGG AGGGCGATTG
GTATACAATA GTTTTACTAA CTTTGATTTT GGCTCCGATC TTGCGGACAA ATCACACAAT
AATAAACGAA CCAGTAATGC TATTGCTTCA AGCCATATCC TTTCCCTGCT ATATGAACAC
TGGAAATTTG CATTTACACT ACGTTATTTT CACAACGGTG GACAATGGAA TGCTGGGGAG
AAAGTTAACT TCGGAGATGG TCCATTTGAA TTAAAAAACA CAGGATGGGG AACCTATACT
ACTATTGGTT ATCAATTTTA A
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| Protein sequence | MCIKKHGIAL SILLIPCIGN AQEIKSEEGW LHQSLNVIGR TDSRFGPRLT NDLYPEYTVA
GRKDWFDFYG YVDLPKFFGV GSHYDVGIWD EGSPLFTEIE PRFSIDKLTG LNLAFGPFKE
WFIANNYVYD MGDNQSSRQS TWYMGLGTDI DTGLPIKLSA NIYAKYQWQN YGAANENEWD
GYRFKIKYSI PLTHLFGGRL VYNSFTNFDF GSDLADKSHN NKRTSNAIAS SHILSLLYEH
WKFAFTLRYF HNGGQWNAGE KVNFGDGPFE LKNTGWGTYT TIGYQF
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