Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4302 |
Symbol | kdgT |
ID | 6146417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4404112 |
End bp | 4405101 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619123 |
Product | 2-keto-3-deoxygluconate permease |
Protein accession | YP_001746247 |
Protein GI | 170682314 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00793] 2-keto-3-deoxygluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.405227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00796393 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAATGC AGATAAAACG CTCGATTGAG AAAATCCCGG GGGGGATGAT GCTCGTCCCG CTATTCCTTG GCGCACTGTG CCACACCTTC TCGCCGGGGG CGGGGAAATA TTTTGGATCA TTCACCAACG GGATGATTAC CGGTACGGTG CCCATTCTGG CGGTGTGGTT TTTTTGCATG GGGGCGTCAA TAAAATTAAG CGCGACGGGA ACGGTATTGC GTAAATCCGG CACGCTGGTG GTAACAAAAA TTGCCGTCGC GTGGGTGGTT GCGGCGATTG CCTCGCGCAT TATTCCGGAA CATGGTGTTG AAGTTGGATT CTTTGCCGGA CTTTCAACGC TGGCGCTGGT GGCGGCGATG GATATGACCA ACGGCGGACT TTACGCTTCC ATCATGCAGC AGTACGGCAC AAAAGAAGAA GCTGGGGCAT TTGTGTTGAT GTCATTGGAG TCCGGGCCGC TCATGACGAT GATTATTCTG GGCACTGCCG GGATTGCCTC GTTTGAACCG CATGTTTTCG TCGGCGCAGT ATTACCGTTC CTGGTGGGCT TTGCCCTTGG GAACCTTGAC CCTGAATTAC GAGAATTTTT CAGCAAAGCG GTGCAGACGC TGATTCCATT CTTTGCCTTC GCGCTGGGCA ATACCATTGA TTTGACTGTA ATTGCCCAGA CAGGTTTGCT GGGGATCCTG TTGGGTGTGG CAGTAATTAT CGTGACCGGT ATTCCGTTGA TTATCGCTGA TAAATTGATT GGCGGTGGCG ATGGCACTGC CGGAATTGCC GCTTCCAGTT CCGCAGGGGC CGCGGTAGCG ACACCTGTGC TGATTGCAGA AATGGTGCCT GCGTTTAAAC CGATGGCTCC GGCAGCAACT TCGCTGGTAG CGACGGCGGT CATTGTGACT TCGATTCTGG TGCCAATTCT TACCTCTATC TGGTCACGTA AAGTCAAAGC CAGAGCGGCG AAAATCGAAA TTTTAGGTAC GGTGAAATAA
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Protein sequence | MEMQIKRSIE KIPGGMMLVP LFLGALCHTF SPGAGKYFGS FTNGMITGTV PILAVWFFCM GASIKLSATG TVLRKSGTLV VTKIAVAWVV AAIASRIIPE HGVEVGFFAG LSTLALVAAM DMTNGGLYAS IMQQYGTKEE AGAFVLMSLE SGPLMTMIIL GTAGIASFEP HVFVGAVLPF LVGFALGNLD PELREFFSKA VQTLIPFFAF ALGNTIDLTV IAQTGLLGIL LGVAVIIVTG IPLIIADKLI GGGDGTAGIA ASSSAGAAVA TPVLIAEMVP AFKPMAPAAT SLVATAVIVT SILVPILTSI WSRKVKARAA KIEILGTVK
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