Gene EcSMS35_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4249 
Symbol 
ID6142976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4346130 
End bp4346639 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content53% 
IMG OID641619070 
Producthypothetical protein 
Protein accessionYP_001746194 
Protein GI170680494 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.236524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.104711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAT CATCTTCAAA CTCACGCAGC AAAGGTCATG CAAAAGCGCG TCGAAAAACA 
CGCGAGGAGC TGGATCAGGA AGCTCGTGAC CGTAAGCGTC AGAAAAAACG TCGTGGTCAT
GCGCCGGGCA GCCGCGCAGC GGGCGGTAAC ACCTCGTCAG GCAGCAAAGG CCAGAACGCA
CCAAAAGATC CACGTATTGG CAGTAAAACC CCTATTCCAT TGGGCGTGAC TGAAAAAGTC
ACCAAACAGC ACAAACCGAA GAGTGAGAAA CCTATGCTTT CACCGCAGGC GGAGTTGGAA
TTACTGGAAA CGGATGAGCG TCTGGATGCG CTGCTGGAAC GTCTGGAAGC AGGCGAAACC
CTGAGCGCCG AAGAGCAATC CTGGGTGGAT GCTAAACTGG ATCGTATTGA TGAGTTGATG
CAGAAACTCG GCCTCTCTTA TGACGATGAC GAAGAAGAGG AAGAAGACGA GAAGCAAGAA
GACATGATGC GTCTGCTGCG GGGCAACTAA
 
Protein sequence
MKPSSSNSRS KGHAKARRKT REELDQEARD RKRQKKRRGH APGSRAAGGN TSSGSKGQNA 
PKDPRIGSKT PIPLGVTEKV TKQHKPKSEK PMLSPQAELE LLETDERLDA LLERLEAGET
LSAEEQSWVD AKLDRIDELM QKLGLSYDDD EEEEEDEKQE DMMRLLRGN