Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4230 |
Symbol | trkH |
ID | 6145261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4328191 |
End bp | 4329642 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619053 |
Product | potassium transporter |
Protein accession | YP_001746181 |
Protein GI | 170679843 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000116067 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0142841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTTC GCGCCATTAC CCGAATCGTT GGACTACTGG TCATCTTATT TTCAGGGACC ATGATTATCC CTGGGCTGGT AGCACTCATC TACCGGGATG GAGCGGGCCG CGCTTTTACC CAGACCTTTT TTGTCGCCCT CGCCATTGGC TCTATGCTGT GGTGGCCGAA CCGCAAAGAG AAGGGCGAAC TGAAATCCCG TGAGGGGTTT CTGATAGTGG TGCTGTTCTG GACCGTGCTG GGTAGTGTCG GTGCGCTCCC TTTTATCTTC TCGGAAAGCC CGAACCTCAC GATTACCGAT GCGTTTTTTG AATCTTTCTC TGGCCTGACC ACCACGGGAG CCACTACGCT GGTGGGGCTG GATTCGCTCC CTCATGCCAT CCTCTTTTAT CGCCAGATGC TGCAATGGTT TGGCGGGATG GGGATCATCG TGTTGGCGGT TGCGATACTG CCTATCCTCG GCGTGGGTGG GATGCAGCTC TATCGCGCAG AAATGCCCGG CCCGCTGAAA GATAACAAAA TGCGCCCGCG AATTGCGGAA ACGGCGAAAA CCCTGTGGTT GATTTATGTC TTGCTGACCG TCGCCTGTGC GCTGGCGTTG TGGTTTGCTG GAATGGATGC CTTTGATGCC ATCGGCCATA GCTTTGCGAC TATCGCTATT GGCGGCTTCT CGACACATGA TGCCAGTATC GGTTATTTCG ACAGCCCGAC TATTAACACT ATCATTGCTA TCTTCCTGCT GATCTCTGGC TGTAACTACG GTCTGCACTT TTCACTGTTA AGTGGGCGTA GTCTGAAGGT TTATTGGCGC GATCCGGAAT TTCGCATGTT TATCGGCGTA CAGTTTTCAC TGGTGGTTAT TTGTACACTC GTACTGTGGT TTCATAATGT CTACAGTTCG GCGCTGATGA CAATTAACCA GGCGTTTTTC CAGGTGGTGT CGATGGCGAC AACCGCCGGG TTTACAACTG ACAGCATTGC CCGCTGGCCG CTCTTTTTGC CGGTACTGCT CTTATGTTCA GCTTTTATCG GCGGTTGTGC CGGGTCAACG GGCGGTGGCC TGAAAGTGAT CCGCATCCTG CTGCTGTTTA AGCAGGGGAA CCGTGAGCTG AAACGACTGG TGCATCCGAA CGCCGTCTAT AGCATTAAGC TGGGGAATCG CGCACTGCCG GAACGTATCC TCGAAGCCGT GTGGGGATTT TTCTCCGCCT ATGCATTGGT GTTTATTGTC AGTATGCTGG CGATTATCGC CACGGGCGTG GATGACTTTT CTGCCTTTGC CTCGGTTGTT GCGACATTGA ATAACCTGGG GCCAGGGCTT GGTGTGGTTG CTGATAACTT TACCAGTATG AACCCGGTGG CTAAATGGAT CCTGATTGCC AACATGCTGT TTGGTCGTCT CGAGGTCTTT ACATTGCTGG TGCTCTTTAC CCCGACTTTC TGGCGTGAAT GA
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Protein sequence | MHFRAITRIV GLLVILFSGT MIIPGLVALI YRDGAGRAFT QTFFVALAIG SMLWWPNRKE KGELKSREGF LIVVLFWTVL GSVGALPFIF SESPNLTITD AFFESFSGLT TTGATTLVGL DSLPHAILFY RQMLQWFGGM GIIVLAVAIL PILGVGGMQL YRAEMPGPLK DNKMRPRIAE TAKTLWLIYV LLTVACALAL WFAGMDAFDA IGHSFATIAI GGFSTHDASI GYFDSPTINT IIAIFLLISG CNYGLHFSLL SGRSLKVYWR DPEFRMFIGV QFSLVVICTL VLWFHNVYSS ALMTINQAFF QVVSMATTAG FTTDSIARWP LFLPVLLLCS AFIGGCAGST GGGLKVIRIL LLFKQGNREL KRLVHPNAVY SIKLGNRALP ERILEAVWGF FSAYALVFIV SMLAIIATGV DDFSAFASVV ATLNNLGPGL GVVADNFTSM NPVAKWILIA NMLFGRLEVF TLLVLFTPTF WRE
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