| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4227 |
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| Symbol | fadB |
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| ID | 6146603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4323828 |
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| End bp | 4326017 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619050 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001746178 |
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| Protein GI | 170684115 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00427861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00453732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTTACA AAGGCGACAC CCTGTACCTT GACTGGCTGG AAGATGGCAT TGCCGAACTG
GTATTTGATG CCCCAGGTTC AGTTAATAAA CTCGACACTG CCACCGTCGC CAGCCTCGGC
GAGGCCATCG GCGTGCTGGA ACAGCAATCA GATCTAAAAG GGCTGCTGCT GCGTTCGAAC
AAAGCAGCCT TTATCGTCGG TGCTGATATC ACCGAATTTT TGTCCCTGTT CCTCGTTCCT
GAAGAACAGT TAAGTCAGTG GCTGCACTTT GCCAATAGCG TGTTTAATCG CCTGGAAGAT
CTGCCGGTGC CGACCATTGC TGCCGTCAAC GGCTATGCGC TGGGCGGTGG CTGCGAATGC
GTGCTGGCGA CCGATTATCG TCTGGCGACG CCGGATCTGC GCATCGGTCT GCCGGAAACC
AAACTGGGCA TCATGCCGGG CTTTGGCGGT TCTGTACGTA TGCCACGTAT GCTGGGCGCT
GACAGTGCGC TGGAAATCAT TGCCGCCGGT AAAGATGTCG GCGCGGATCA GGCGCTGAAA
ATCGGTCTGG TGGATGGTGT AGTCAAAGCA GAAAAACTGA TTGAAGGGGC GATGGCGATT
TTACGCCAGG CCATTAACGG CGACCTCGAC TGGAAAGCGA AACGTCAGCC GAAGCTGGAA
CCGCTAAAAC TGAGCGAGAT TGAAGCCACC ATGAGCTTCA CCATCGCTAA AGGGATGGTC
GCACAAACGG CGGGGAAACA TTATCCGGCC CCCATCACCG CAGTAAAAAC CATTGAAGCT
GCGGCCCGTT TTGGTCGTGA AGAAGCCCTA AACCTGGAAA ACAAAAGTTT TGTCCCGCTG
GCGCATACCA ACGAAGCTCG CGCACTGGTC GGCATTTTCC TTAACGATCA ATATGTAAAA
GGCAAAGCGA AGAAACTCAC CAAAGACGTT GAAACCCCGA AACAGGCCGC TGTGCTGGGC
GCAGGCATTA TGGGTGGCGG CATCGCTTAC CAGTCTGCGT GGAAAGGCGT ACCGGTTGTC
ATGAAAGATA TCAACGACAA GTCGTTAACC CTCGGCATGA CCGAAGCCGC GAAACTGCTG
AACAAGCAGC TTGAGCGCGG CAAGATCGAT GGTCTGAAAC TGGCTGGCGT GATCTCCACA
ATTCACCCAA CGCTCGACTA CGCCGGGTTT GACCGCGTGG ATGTTGTGGT AGAAGCGGTT
GTTGAAAACC CGAAAGTGAA AAAAGCCGTA CTGGCAGAAA CCGAACAAAA AGTACGCCCG
GATACCGTAC TGGCGTCTAA CACTTCAACC ATTCCTATCA GCGAACTGGC CAACGCGCTG
GAACGTCCGG AAAACTTCTG CGGGATGCAC TTCTTTAACC CGGTCCACCG AATGCCGTTA
GTAGAAATTA TTCGCGGCGA GAAAAGCTCC GACGAAACCA TCGCGAAAGT CGTCGCCTGG
GCGAGCAAGA TGGGCAAAAC GCCGATTGTG GTTAACGACT GCCCCGGCTT CTTCGTCAAC
CGTGTACTGT TCCCCTATTT CGCCGGTTTC AGCCAGTTGC TGCGCGACGG CGCGGATTTC
CGCAAGATCG ACAAAGTGAT GGAAAAACAG TTTGGCTGGC CGATGGGGCC GGCATATCTG
CTGGACGTTG TGGGGATTGA TACCGCGCAT CACGCTCAGG CGGTGATGGC AGCAGGCTTC
CCGCAGCGGA TGCAGAAAGA TTACCGCGAT GCCATCGATG CGCTGTTTGA TGCCAACCGT
TTTGGTCAGA AGAACGGCCT CGGTTTCTGG CGTTATAAAG AAGACAGTAA AGGCAAGCCG
AAGAAAGAAG AAGATGCCGT CGTTGACGAC CTGCTGGCAG AAGTGAGCCA GCCGAAGCGC
GATTTCAGCG AAGAAGAGAT TATCGCCCGC ATGATGATCC CGATGGTCAA CGAAGTGGTG
CGCTGTCTGG AAGAAGGCAT TATCGCCACT CCAGCAGAAG CGGATATGGC GCTGGTCTAC
GGACTGGGGT TCCCTCCGTT CCACGGCGGC GCGTTCCGCT GGCTGGACAC CCTCGGTAGC
GCAAAATACC TCGATATGGC ACAACAATAT CAGCACCTCG GCCCGCTGTA TGAAGTGCCG
GAAGGTCTGC GTAATAAAGC GCGTCATAAC GAACCGTACT ATCCCCCGGT TGAGCCAGCC
CGTCCGGTTG GCGACCTGAA AACGGCTTAA
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| Protein sequence | MLYKGDTLYL DWLEDGIAEL VFDAPGSVNK LDTATVASLG EAIGVLEQQS DLKGLLLRSN
KAAFIVGADI TEFLSLFLVP EEQLSQWLHF ANSVFNRLED LPVPTIAAVN GYALGGGCEC
VLATDYRLAT PDLRIGLPET KLGIMPGFGG SVRMPRMLGA DSALEIIAAG KDVGADQALK
IGLVDGVVKA EKLIEGAMAI LRQAINGDLD WKAKRQPKLE PLKLSEIEAT MSFTIAKGMV
AQTAGKHYPA PITAVKTIEA AARFGREEAL NLENKSFVPL AHTNEARALV GIFLNDQYVK
GKAKKLTKDV ETPKQAAVLG AGIMGGGIAY QSAWKGVPVV MKDINDKSLT LGMTEAAKLL
NKQLERGKID GLKLAGVIST IHPTLDYAGF DRVDVVVEAV VENPKVKKAV LAETEQKVRP
DTVLASNTST IPISELANAL ERPENFCGMH FFNPVHRMPL VEIIRGEKSS DETIAKVVAW
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF SQLLRDGADF RKIDKVMEKQ FGWPMGPAYL
LDVVGIDTAH HAQAVMAAGF PQRMQKDYRD AIDALFDANR FGQKNGLGFW RYKEDSKGKP
KKEEDAVVDD LLAEVSQPKR DFSEEEIIAR MMIPMVNEVV RCLEEGIIAT PAEADMALVY
GLGFPPFHGG AFRWLDTLGS AKYLDMAQQY QHLGPLYEVP EGLRNKARHN EPYYPPVEPA
RPVGDLKTA
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