| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4226 |
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| Symbol | fadA |
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| ID | 6147277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4322655 |
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| End bp | 4323818 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641619049 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001746177 |
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| Protein GI | 170682404 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.032199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00446338 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACAGG TTGTCATTGT CGATGCAATT CGCACCCCGA TGGGCCGTTC GAAGGGCGGT
GCTTTTCGTC ACGTGCGTGC GGAAGATCTC TCCGCTCATT TAATGCGTAG CCTGCTGGCG
CGTAACCCGG CGCTGGAAGC GGCGGCCCTC GACGATATTT ACTGGGGCTG TGTACAGCAG
ACGCTGGAGC AAGGTTTTAA TATCGCCCGT AACGCGGCGC TGTTGGCAGA AGTACCACAC
TCTGTCCCGG CGGTGACCGT CAATCGCCTG TGTGGTTCAT CCATGCAAGC ATTACATGAC
GCAGCGCGAA TGATCATGAC CGGCGATGCG CAGGCATGTC TGGTTGGCGG CGTGGAGCAT
ATGGGCCATG TGCCGATGAG TCACGGCGTC GATTTTCACC CCGGCCTGAG CCGCAATGTC
GCCAAAGCGG CGGGCATGAT GGGCTTAACG GCAGAAATGC TGGCGCGTAT GCACGGTATC
AGCCGTGAAA TGCAGGATGC CTTTGCCGCG CGGTCACACG CCCGCGCCTG GGCCGCCACG
CAGTCGGGTG CATTTAAAAA TGAAATTATC CCGACCGGTG GTCACGATGC CGACGGCGTC
CTGAAGCAGT TTAATTACGA CGAAGTGATT CGCCCGGAAA CCACCGTGGA AGCCCTCGCC
ACGCTGCGCC CGGCGTTTGA TCCCGTCAGC GGTACGGTGA CGGCAGGTAC ATCTTCTGCG
CTTTCCGATG GCGCAGCTGC CATGCTGGTG ATGAGTGAAA GCCGCGCCCG AGAATTAGGT
CTTAAGCCGC GCGCCCGCGT GCGTTCGATG GCGGTCGTTG GTTGTGACCC ATCGATTATG
GGTTACGGCC CGGTTCCGGC CTCGAAGCTG GCGCTGAAAA AAGCGGGGCT TTCTGCCAGC
GATATCGGCG TATTCGAGAT GAACGAAGCC TTTGCCGCGC AGATCCTGCC ATGTATTAAA
GATCTCGGGC TAATGGAGCA GATTGACGAG AAGATCAACC TCAACGGTGG CGCGATCGCG
CTGGGTCATC CGCTGGGTTG TTCCGGTGCG CGTATCAGCA CCACGCTGCT GAATCTGATG
GAGCGCAAAG ATGCCCAGTT TGGTCTGGCG ACGATGTGTA TCGGTCTGGG TCAGGGTATT
GCGACGGTGT TTGAGCGGAT TTAA
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| Protein sequence | MEQVVIVDAI RTPMGRSKGG AFRHVRAEDL SAHLMRSLLA RNPALEAAAL DDIYWGCVQQ
TLEQGFNIAR NAALLAEVPH SVPAVTVNRL CGSSMQALHD AARMIMTGDA QACLVGGVEH
MGHVPMSHGV DFHPGLSRNV AKAAGMMGLT AEMLARMHGI SREMQDAFAA RSHARAWAAT
QSGAFKNEII PTGGHDADGV LKQFNYDEVI RPETTVEALA TLRPAFDPVS GTVTAGTSSA
LSDGAAAMLV MSESRARELG LKPRARVRSM AVVGCDPSIM GYGPVPASKL ALKKAGLSAS
DIGVFEMNEA FAAQILPCIK DLGLMEQIDE KINLNGGAIA LGHPLGCSGA RISTTLLNLM
ERKDAQFGLA TMCIGLGQGI ATVFERI
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