| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4221 |
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| Symbol | tatC |
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| ID | 6144785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4317972 |
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| End bp | 4318748 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619044 |
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| Product | twin-arginine protein translocation system subunit TatC |
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| Protein accession | YP_001746172 |
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| Protein GI | 170683092 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00142004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGTAG AAGATACTCA ACCGCTTATC ACGCATCTGA TTGAGCTGCG TAAGCGTCTG
CTGAACTGCA TTATCGCGGT GATCGTGATA TTCCTGTGTC TGGTCTATTT CGCCAATGAC
ATCTATCACC TGGTATCCGC GCCATTGATC AAGCAGTTGC CGCAAGGTTC AACGATGATC
GCCACCGACG TGGCCTCGCC GTTCTTTACG CCGATCAAGC TGACCTTTAT GGTGTCGCTG
ATTCTGTCAG CGCCGGTGAT TCTCTATCAG GTGTGGGCGT TTATCGCCCC AGCGCTGTAT
AAGCATGAAC GTCGCCTGGT GGTGCCGCTG CTGGTTTCCA GCTCTCTGCT TTTTTATATC
GGCATGGCGT TCGCCTACTT TGTGGTCTTT CCGCTGGCAT TTGGCTTCCT TGCCAATACC
GCGCCGGAAG GGGTACAGGT ATCCACCGAC ATCGCCAGCT ATTTAAGCTT CGTTATGGCG
TTGTTTATGG CGTTTGGTGT CTCCTTTGAA GTGCCTGTGG CAATTGTGCT GCTGTGCTGG
ATGGGGATTA CCTCGCCAGA AGACTTACGC AAAAAACGCC CGTATGTGCT GGTTGGTGCA
TTCGTTGTCG GGATGTTGCT GACGCCGCCG GATGTCTTCT CGCAAACGCT GCTGGCGATC
CCGATGTACT GCCTGTTTGA AATCGGTGTC TTCTTCTCTC GCTTTTACGT TGGTAAGGGT
CGAAACCGGG AAGAGGAAAA CGACGCTGAA GCAGAAAGCG AAAAAACTGA AGAATAA
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| Protein sequence | MSVEDTQPLI THLIELRKRL LNCIIAVIVI FLCLVYFAND IYHLVSAPLI KQLPQGSTMI
ATDVASPFFT PIKLTFMVSL ILSAPVILYQ VWAFIAPALY KHERRLVVPL LVSSSLLFYI
GMAFAYFVVF PLAFGFLANT APEGVQVSTD IASYLSFVMA LFMAFGVSFE VPVAIVLLCW
MGITSPEDLR KKRPYVLVGA FVVGMLLTPP DVFSQTLLAI PMYCLFEIGV FFSRFYVGKG
RNREEENDAE AESEKTEE
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