Gene EcSMS35_4206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4206 
Symbol 
ID6143836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4305044 
End bp4305853 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID641619029 
Productdienelactone hydrolase family protein 
Protein accessionYP_001746157 
Protein GI170680205 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000877073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACAA CACAACAATC TGGATTTGCA CCTGCTGCAT CGCCTCTCGC TTCGACCATC 
GTTCAGACTC CGGACGACGC GATTGTGGCG GGCTTCACCT CTATCCCTTC ACAAGGGGAT
AACATGCCTG CTTACCATGC CAGACCAAGG CAAAGCGATG GCCCACTGCC AGTGGTCATT
GTAGTGCAGG AAATTTTTGG CGTGCATGAA CATATCCGCG ATATTTGTCG CCGTCTGGCG
CTGGAGGGGT ATCTGGCTAT CGCACCTGAA CTTTACTTCC GCGAAGGCGA TCCGAATGAT
TTTGCCGATA TCCCTACGCT GCTTAGCGGT CTGGTAGCAA AAGTGCCTGA CTCGCAGGTG
CTGGCCGATC TCGATCATGT CGCCAGTTGG GCTTCCCGCA ACGGCGGCGA TGTTCATCGT
TTAATGATCA CCGGATTCTG CTGGGGTGGA CGTATCACCT GGCTGTATGC CGCGCATAAT
CCACAACTGA AAGCAGCGGT GGCATGGTAC GGCAAATTAA CCGGCGATAA GACGCTGAAT
TCACCGAAAC AACCTGTTGA TATCGCAACC GATCTTAACG CGCCGGTTCT CGGCTTATAT
GGTGGTCAGG ATAACAGCAT TCCGCAAGAG AGTGTGGAAA CGATGCGCCA GGCGCTGCGG
GCAGCAAACG CGAAAGCAGA GATTATCGTG TACCCGGATG CAGGGCATGC GTTCAACGCC
GATTATCGTC CGAGCTATCA TGCCGAGTCT GCGAAAGACG GCTGGCAGCG AATGTTGGAA
TGGTTTACAC AGTATGGTGT TAAAAAGTAA
 
Protein sequence
MATTQQSGFA PAASPLASTI VQTPDDAIVA GFTSIPSQGD NMPAYHARPR QSDGPLPVVI 
VVQEIFGVHE HIRDICRRLA LEGYLAIAPE LYFREGDPND FADIPTLLSG LVAKVPDSQV
LADLDHVASW ASRNGGDVHR LMITGFCWGG RITWLYAAHN PQLKAAVAWY GKLTGDKTLN
SPKQPVDIAT DLNAPVLGLY GGQDNSIPQE SVETMRQALR AANAKAEIIV YPDAGHAFNA
DYRPSYHAES AKDGWQRMLE WFTQYGVKK