Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4192 |
Symbol | pldB |
ID | 6146621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4290481 |
End bp | 4291503 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619015 |
Product | lysophospholipase L2 |
Protein accession | YP_001746143 |
Protein GI | 170684143 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00143921 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTCAGC AGCAAAAAGA CTGGGAAACA AGAGAAAACG CGTTTGCTGC TTTTACCATG GGACCGCTGA CTGATTTCTG GCGTCAGCGT GATGAAGCAG AATTTACTGG TGTGGATGAC ATTCCGGTGC GCTTTGTCCG TTTTCGCGCA CAGCACCATG ACCGGGTGGT AGTCATCTGC CCGGGGCGTA TTGAGAGCTA CGTAAAATAT GCGGAACTGG CCTATGACCT GTTCCATTTG GGGTTTGATG TCTTAATCAT CGACCATCGC GGGCAGGGAC GTTCCGGTCG CCTGTTAGCC GATCCGCATC TCGGGCATGT TAATCGCTTT AATGATTATG TTGATGATCT GGCGGCATTC TGGCAGCAGG AGGTTCAGCC CGGTCCGTGG CGTAAACGCT ATATACTGGC ACATTCAATG GGCGGTGCGA TCTCCACATT ATTTCTGCAA CGCCATCCAG GTGTATGTGA CGCCATTGCG CTAACTGCGC CAATGTTTGG GATCGTGATT CGTATGCCGT CATTTATGGC ACGGCAGATC CTCAACTGGG CCGAAGCGCA TCCACGTTTC CGTGATGGCT ATGCAATAGG CACCGGGCGC TGGCGCGCGT TGCCGTTTGC TATCAACGTA CTGACCCACA GCAGACAGCG ATATCGACGT AACTTACGCT TTTATGCTGA TGACCCAACG ATTCGCGTCG GTGGGCCGAC CTACCATTGG GTACGCGAAA GTATTCTGGC TGGCGAACAG GTGTTAGCCG GTGCGGGTGA TGACGCCACG CCAACGCTTC TCTTACAAGC TGAAGAGGAA CGCGTGGTGG ATAACCGCAT GCACGACCGT TTTTGTGAAC TACGCACCGC TGCGGGCCAT CCTGTCGAAG GAGGACGGCC GTTGGTAATT AAAGGTGCGT ACCATGAGAT CCTTTTTGAA AAGGACGCAA TGCGCTCAGT CGCGCTCCAC GCTATCGTTG ATTTTTTCAA CAGGCATAAC TCACCCAGCG GAAACCGCTC TACAGAGGTT TAA
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Protein sequence | MFQQQKDWET RENAFAAFTM GPLTDFWRQR DEAEFTGVDD IPVRFVRFRA QHHDRVVVIC PGRIESYVKY AELAYDLFHL GFDVLIIDHR GQGRSGRLLA DPHLGHVNRF NDYVDDLAAF WQQEVQPGPW RKRYILAHSM GGAISTLFLQ RHPGVCDAIA LTAPMFGIVI RMPSFMARQI LNWAEAHPRF RDGYAIGTGR WRALPFAINV LTHSRQRYRR NLRFYADDPT IRVGGPTYHW VRESILAGEQ VLAGAGDDAT PTLLLQAEEE RVVDNRMHDR FCELRTAAGH PVEGGRPLVI KGAYHEILFE KDAMRSVALH AIVDFFNRHN SPSGNRSTEV
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