| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4191 |
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| Symbol | rhtB |
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| ID | 6147230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4289750 |
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| End bp | 4290370 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619014 |
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| Product | homoserine/homoserine lactone efflux protein |
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| Protein accession | YP_001746142 |
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| Protein GI | 170682422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00349541 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCTTAG AATGGTGGTT TGCCTACCTG CTGACATCGA TCATTTTAAG CCTGTCGCCA
GGCTCTGGCG CAATCAACAC CATGACCACC TCGCTCAACC ACGGTTATCG CGGCGCGGTG
GCGTCTATTG CTGGGCTTCA GACCGGACTG GCGATTCATA TTGTGCTGGT TGGCGTGGGG
TTGGGGACGC TATTTTCCCG CTCAGTGATT GCGTTTGAAG TGTTGAAGTG GGCAGGCGCA
GCTTACTTGA TTTGGCTGGG AATACAGCAA TGGCGCGCCG CTGGTGCAAT TGACCTTAAA
TCGCCAGCCT CTACTCAATC GCGCCGACAT TTGTTCCAGC GCGCAGTTTT TGTGAATCTT
ACCAATCCCA AAAGTATTGT GTTTCTGGCG GCGCTATTTC CGCAATTCAT CATGCCGCAG
CAGCCACAAC TGATGCAGTA TATCGTGCTC GGCGTCACCA CTATTGTGGT CGATATTATT
GTGATGATCG GTTACGCCAC CCTTGCTCAA CGGATTGCTC TATGGATTAA AGGACCAAAG
CAGATGAAGG CGCTGAATAA GATTTTCGGC TCGTTGTTTA TGCTGGTGGG AGCGCTGTTA
GCATCGGCGA GGCATGCGTG A
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| Protein sequence | MTLEWWFAYL LTSIILSLSP GSGAINTMTT SLNHGYRGAV ASIAGLQTGL AIHIVLVGVG
LGTLFSRSVI AFEVLKWAGA AYLIWLGIQQ WRAAGAIDLK SPASTQSRRH LFQRAVFVNL
TNPKSIVFLA ALFPQFIMPQ QPQLMQYIVL GVTTIVVDII VMIGYATLAQ RIALWIKGPK
QMKALNKIFG SLFMLVGALL ASARHA
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