Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4188 |
Symbol | pldA |
ID | 6143900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4286181 |
End bp | 4287050 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619011 |
Product | phospholipase A |
Protein accession | YP_001746139 |
Protein GI | 170681373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2829] Outer membrane phospholipase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0102786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGACTC TGCAGGGCTG GTTGTTGCCG GTGTTTATGT TGCCTATGGC AGTATATGCA CAAGAGGCAA CGGTGAAAGA GGTGCATGAC GCGCCAGCGG TGCGTGGCAG TATTATCGCC AATATGCTGC AGGAGCATGA CAATCCGTTC ACCCTTTATC CTTATGACAC CAACTACATC ATCTACACCC AAACCAGCGA TCTGAATAAA GAAGCGATTG CCAGTTACGA CTGGGCGGAA AATGCGCGTA AGGATGAAGT AAAGTTTCAG TTGAGCCTGG CATTTCCGCT GTGGCGTGGG ATTTTAGGCC CGAACTCGGT ATTGGGTGCG TCTTACACGC AAAAATCCTG GTGGCAACTG TCCAATAGCG AAGAGTCTTC ACCGTTTCGT GAAACCAACT ACGAACCGCA ATTGTTCCTC GGTTTTGCCA CCGATTACCG TTTTGCAGGT TGGACGCTGC GCGATGTGGA GATGGGTTAT AACCACGACT CTAACGGGCG TTCAGACCCG ACCTCCCGCA GCTGGAACCG CCTTTATACA CGCCTGATGG CAGAAAACGG TAACTGGCTG GTAGAGGTGA AGCCGTGGTA TGTGGTGGGT AATACTGACG ATAACCCGGA TATCACCAAA TATATGGGTT ACTACCAGCT TAAAATCGGC TATCACCTCG GTGATGCGGT GTTGAGTGCG AAAGGACAGT ACAACTGGAA CACGGGCTAC GGCGGCGCGG AGTTAGGCTT AAGTTACCCG ATCACCAAAC ATGTGCGCCT TTATACTCAG GTTTACAGCG GCTATGGCGA ATCGCTCATC GACTATAACT TCAACCAGAC CCGCGTTGGT GTGGGAGTTA TGCTAAACGA CCTGTTTTGA
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Protein sequence | MRTLQGWLLP VFMLPMAVYA QEATVKEVHD APAVRGSIIA NMLQEHDNPF TLYPYDTNYI IYTQTSDLNK EAIASYDWAE NARKDEVKFQ LSLAFPLWRG ILGPNSVLGA SYTQKSWWQL SNSEESSPFR ETNYEPQLFL GFATDYRFAG WTLRDVEMGY NHDSNGRSDP TSRSWNRLYT RLMAENGNWL VEVKPWYVVG NTDDNPDITK YMGYYQLKIG YHLGDAVLSA KGQYNWNTGY GGAELGLSYP ITKHVRLYTQ VYSGYGESLI DYNFNQTRVG VGVMLNDLF
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