Gene EcSMS35_4137 details

Gene Information

• Locus tag: EcSMS35_4137
• Symbol: ilvD
• ID: 6144498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 4233268
• End bp: 4235118
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641618960
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001746092
• Protein GI: 170682714
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.129603
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 49
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCCGC CACCACCACT CATGGTCGTA ATATGGCGGG TGCTCGTGCG 
CTGTGGCGCG CCACCGGAAT GACCGACGCC GATTTCGGTA AGCCGATTAT CGCGGTTGTG 
AACTCGTTCA CCCAATTTGT ACCGGGTCAC GTCCATCTGC GCGATCTCGG TAAACTGGTC 
GCCGAACAAA TTGAAGCGGC TGGCGGCGTT GCCAAAGAGT TCAACACCAT TGCGGTGGAT 
GATGGGATTG CCATGGGCCA CGGGGGGATG CTTTATTCGC TGCCATCTCG CGAACTGATC 
GCTGATTCCG TTGAGTATAT GGTCAATGCT CACTGCGCCG ACGCCATGGT CTGCATCTCT 
AACTGCGACA AAATCACCCC GGGGATGCTG ATGGCTTCCC TGCGCCTGAA TATTCCGGTG 
ATCTTTGTTT CCGGCGGCCC GATGGAGGCC GGGAAAACCA AACTGTCCGA TCAGATCATC 
AAGCTCGATC TGGTTGATGC GATGATCCAG GGGGCAGACC CGAAAGTTTC TGACTCCCAA 
AGCGATCAGG TTGAACGTTC CGCATGCCCA ACCTGCGGTT CCTGCTCCGG GATGTTTACC 
GCTAACTCAA TGAACTGCCT GACCGAAGCG CTGGGCCTGT CGCAGCCGGG CAACGGCTCG 
CTGCTGGCAA CTCACGCCGA CCGTAAGCAG CTGTTCCTCA ATGCCGGTAA ACGCATTGTT 
GAATTGACCA AACGTTACTA CGAGCAAAAT GACGAAAGTG CACTGCCGCG TAATATCGCC 
AGTAAGGCGG CGTTTGAAAA CGCCATGACG CTGGATATCG CGATGGGTGG ATCGACTAAC 
ACTGTACTTC ACCTGCTGGC GGCGGCGCAG GAAGCGGAAA TCGACTTCAC CATGAGTGAT 
ATCGACAAAC TTTCGCGTAA AGTCCCGCAG TTATGCAAAG TTGCGCCGAG CACCCAGAAA 
TACCATATGG AAGATGTTCA TCGTGCTGGT GGTGTTATCG GTATTCTCGG CGAACTGGAT 
CGCGCGGGGT TACTGAACCG TGATGTGAAA AACGTGCTTG GCCTGACGTT GCCACAAACG 
CTGGAACAAT ACGACGTTAT GCTGACCCAG GATGACTCGG TAAAAAATAT GTTCCGCGCT 
GGCCCTGCGG GCATTCGTAC TACACAGGCA TTCTCGCAGG ATTGCCGTTG GGATTCTCTC 
GATGACGATC GCGCCAATGG CTGTATCCGC TCGCTGGAAC ACGCCTACAG CAAAGAAGGT 
GGTCTGGCGG TGCTGTACGG TAATTTCGCA GAAAACGGCT GCATCGTTAA AACCGCGGGC 
GTCGATGACA GCATCCTCAA ATTCACCGGC CCGGCGAAAG TGTACGAAAG CCAGGATGAC 
GCGGTAGAAG CGATTCTCGG CGGCAAAGTT GTCGCTGGCG ATGTAGTGGT GATCCGCTAT 
GAAGGCCCGA AAGGCGGTCC GGGGATGCAG GAAATGCTCT ACCCAACCAG CTTCCTGAAA 
TCAATGGGTC TCGGTAAAGC CTGCGCGCTG ATCACCGACG GACGCTTCTC CGGCGGCACC 
TCTGGCCTTT CTATCGGCCA CGTCTCACCG GAAGCGGCAA GCGGCGGCAG CATTGGCCTG 
ATTGAAGACG GCGACCTGAT CGCCATCGAC ATTCCGAACC GTGGTATTCA GTTACAGGTA 
AGCGATGCCG AACTGGCGGC GCGTCGTGAA GCGCAGGAAG CTCGTGGCGA CAAAGCCTGG 
ACGCCGAAAA ACCGTGAACG CCAGGTTTCC TTTGCGCTGC GTGCCTACGC CAGCCTGGCA 
ACCAGCGCCG ACAAAGGTGC GGTGCGCGAT AAATCGAAAC TGGGGGGTTA A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDA DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDQII KLDLVDAMIQ GADPKVSDSQ 
SDQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLNAGKRIV 
ELTKRYYEQN DESALPRNIA SKAAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMSD 
IDKLSRKVPQ LCKVAPSTQK YHMEDVHRAG GVIGILGELD RAGLLNRDVK NVLGLTLPQT 
LEQYDVMLTQ DDSVKNMFRA GPAGIRTTQA FSQDCRWDSL DDDRANGCIR SLEHAYSKEG 
GLAVLYGNFA ENGCIVKTAG VDDSILKFTG PAKVYESQDD AVEAILGGKV VAGDVVVIRY 
EGPKGGPGMQ EMLYPTSFLK SMGLGKACAL ITDGRFSGGT SGLSIGHVSP EAASGGSIGL 
IEDGDLIAID IPNRGIQLQV SDAELAARRE AQEARGDKAW TPKNRERQVS FALRAYASLA 
TSADKGAVRD KSKLGG