Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4119 |
Symbol | rbsB |
ID | 6147324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4216077 |
End bp | 4216967 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618943 |
Product | D-ribose transporter subunit RbsB |
Protein accession | YP_001746081 |
Protein GI | 170681554 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.161287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGA AAAAACTGGC TACCCTGGTT TCCGCTGTTG CGCTAAGCGC CACCGTCAGT GCGAATGCGA TGGCAAAAGA CACCATCGCG CTGGTGGTCT CCACGCTTAA CAACCCGTTC TTTGTATCGC TGAAAGATGG CGCGCAGAAA GAGGCGGATA AACTTGGCTA TAACCTGGTG GTGCTGGACT CCCAGAATAA CCCGGCGAAA GAGCTGGCGA ACGTGCAGGA CTTAACCGTT CGCGGCACCA AAATTCTGCT GATTAACCCG ACCGACTCCG ACGCAGTGGG TAATGCTGTG AAGATGGCTA ACCAGGCGAA CATCCCGGTT ATCACTCTTG ACCGCCAGGC AACGAAAGGT GAAGTGGTGA GCCACATTGC TTCTGATAAC GTACTGGGCG GCAAAATCGC CGGTGATTAC ATCGCGAAGA AAGCGGGTGA AGGTGCCAAA GTTATCGAGC TGCAAGGCAT TGCCGGTACA TCCGCAGCCC GTGAACGTGG CGAAGGCTTC CAGCAGGCTG TTGCTGCTCA CAAGTTTAAT GTTCTTGCCA GCCAGCCAGC AGATTTTGAT CGCACTAAAG GTTTGAACGT AATGCAGAAC CTGTTGACCG CACATCCGGA TGTTCAGGCT GTATTCGCGC AGAATGATGA AATGGCGCTG GGCGCGCTGC GCGCACTGCA AACTGCCGGT AAATCGGATG TGATGGTCGT CGGATTTGAC GGTACACCGG ATGGCGAAAA AGCGGTGAAT GATGGCAAAC TAGCAGCGAC TATCGCTCAG CTACCCGATC AGATTGGCGC GAAAGGCGTC GAAACCGCCG ATAAAGTACT GAAAGGTGAG AAAGTTCAGG CTAAGTATCC GGTTGATCTG AAACTGGTTG TTAAGCAGTA G
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Protein sequence | MNMKKLATLV SAVALSATVS ANAMAKDTIA LVVSTLNNPF FVSLKDGAQK EADKLGYNLV VLDSQNNPAK ELANVQDLTV RGTKILLINP TDSDAVGNAV KMANQANIPV ITLDRQATKG EVVSHIASDN VLGGKIAGDY IAKKAGEGAK VIELQGIAGT SAARERGEGF QQAVAAHKFN VLASQPADFD RTKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KSDVMVVGFD GTPDGEKAVN DGKLAATIAQ LPDQIGAKGV ETADKVLKGE KVQAKYPVDL KLVVKQ
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