Gene EcSMS35_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4106 
SymbolatpB 
ID6145457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4201035 
End bp4201850 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content50% 
IMG OID641618930 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001746068 
Protein GI170681900 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000706624 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0652596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAG AAAATATGAC GCCGCAGGAT TACATAGGAC ACCACCTGAA CAACCTTCAG 
CTGGACCTGC GTACATTCTC GCTGGTGGAT CCACATAACC CCCCAGCCAC CTTCTGGACA
ATCAATATTG ACTCCATGTT CTTCTCGGTG GTGCTGGGTC TGTTGTTCCT GGTTTTATTC
CGTAGCGTAG CCAAAAAGGC GACCAGCGGT GTGCCAGGTA AGTTTCAGAC CGCGATTGAG
CTGGTGATCG GCTTTGTTAA TGGTAGCGTG AAAGACATGT ACCATGGCAA AAGCAAGCTG
ATTGCTCCGC TGGCCCTGAC GATCTTCGTC TGGGTATTCC TGATGAACCT GATGGATTTA
CTGCCTATCG ACCTGCTGCC GTACATTGCT GAACATGTAC TGGGGCTGCC GGCACTGCGT
GTGGTTCCGT CTGCGGACGT GAACGTAACG CTGTCTATGG CACTGGGCGT ATTTATCCTG
ATTCTGTTCT ACAGCATCAA AATGAAAGGC ATCGGCGGCT TCACGAAAGA GTTGACGCTG
CAGCCGTTCA ATCACTGGGC GTTCATTCCT GTCAACTTAA TCCTTGAAGG GGTAAGCCTG
CTGTCCAAAC CAGTTTCACT CGGTTTGCGA CTGTTCGGTA ACATGTATGC CGGTGAGCTG
ATTTTCATTC TGATTGCTGG TCTGTTGCCG TGGTGGTCAC AGTGGATTCT GAATGTGCCG
TGGGCCATTT TCCACATCCT GATCATTACG CTGCAAGCCT TCATCTTCAT GGTTCTGACG
ATCGTCTATC TGTCGATGGC GTCTGAAGAA CATTAA
 
Protein sequence
MASENMTPQD YIGHHLNNLQ LDLRTFSLVD PHNPPATFWT INIDSMFFSV VLGLLFLVLF 
RSVAKKATSG VPGKFQTAIE LVIGFVNGSV KDMYHGKSKL IAPLALTIFV WVFLMNLMDL
LPIDLLPYIA EHVLGLPALR VVPSADVNVT LSMALGVFIL ILFYSIKMKG IGGFTKELTL
QPFNHWAFIP VNLILEGVSL LSKPVSLGLR LFGNMYAGEL IFILIAGLLP WWSQWILNVP
WAIFHILIIT LQAFIFMVLT IVYLSMASEE H