| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4099 |
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| Symbol | atpC |
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| ID | 6143912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4195352 |
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| End bp | 4195771 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618923 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001746061 |
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| Protein GI | 170682907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.420004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGA CTTACCACCT GGACGTCGTC AGTGCAGAGC AACAAATGTT CTCTGGTCTG
GTCGAGAAAA TCCAGGTAAC GGGTAGCGAA GGTGAACTGG GGATCTACCC TGGCCACGCA
CCGCTGCTCA CCGCCATTAA GCCTGGTATG ATTCGCATCG TGAAACAGCA CGGTCACGAA
GAGTTTATCT ATCTGTCTGG CGGCATTCTT GAAGTGCAGC CTGGCAACGT GACCGTTCTG
GCCGACACCG CAATTCGCGG CCAGGATCTC GACGAAGCGC GAGCCATGGA AGCGAAACGT
AAGGCTGAAG AGCACATTAG CAGCTCTCAC GGCGACGTAG ATTACGCTCA GGCGTCTGCG
GAACTGGCCA AAGCGATCGC GCAGCTGCGC GTTATCGAGT TGACCAAAAA AGCGATGTAA
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| Protein sequence | MAMTYHLDVV SAEQQMFSGL VEKIQVTGSE GELGIYPGHA PLLTAIKPGM IRIVKQHGHE
EFIYLSGGIL EVQPGNVTVL ADTAIRGQDL DEARAMEAKR KAEEHISSSH GDVDYAQASA
ELAKAIAQLR VIELTKKAM
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